SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24747

Length: 670 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24747

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	multicopper oxidase, putative (EC:1.10.3.3)	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	protein	-	-	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cupredoxin	IPR008972	-	0.0	84%
Blast2go	Multicopper oxidase, type 3	IPR011707	-	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
199	50		49		1.0
323	93			6	0.999453
365	86		13		1.0
395		10	90		0.90298
406		14	85		0.993533
407	85		14		0.993533
414			14	85	0.993533
417	14	85			0.993533
418	85		14		0.993533
419	85		14		0.993533
421		14	85		0.993533
459	50		50		1.0
495			80	20	0.995493
496	80	20			0.995493
502	80	20			0.995493
505		80	20		0.995493
510			80	20	0.995493
513	80	20			0.995493
514			80	20	0.995493
515	80	20			0.995493
516	20			80	0.995493
519	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain