SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24745

Length: 1552 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24745

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	[R] COG0627 Predicted esterase	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	esterase d	-	-	85%

Source	ECs	Term	Type	e value	Identity
Blast2go	S-formylglutathione hydrolase.	EC:3.1.2.12	-	0.0	85%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Methane metabolism	00680		0.0	85%

Source	GOs	Term	Type	e value	Identity
Blast2go	S-formylglutathione hydrolase activity	GO:0018738	Molecular Function	0.0	85%
Blast2go	apoplast	GO:0048046	Cellular Component	0.0	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Putative esterase	IPR000801	-	0.0	85%
Blast2go	S-formylglutathione hydrolase	IPR014186	-	0.0	85%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NNG6

Fln msg:

Fln protein: MEGPTEISSNKMFGGFNRRYKHYSPTLGCDMTFSIFFPPASVTKKVPVLYWLSGLTCTDENFIIKSGAQRAASKESVALVAPDTSPRGLNVEGESDSWDFGVGAGFYLNATQKKWANWRMYDYVVDELPKLLSSHFSQLDPANASIFGHSMGGHGALTVFFKNQNKYKSVSAFAPIVNPIDCPWGQKAFLNYLGDDKSSWEEYDATYLVKKCNGLSKTILIDQGEEDKFLHNQLLPHKFEEACKIANVPLTLRLQPGYDHSFFFIATFIDEHIEHHSKVLHAS*

Protein Length: 285

Fln nts: ATGGGGAGGTGGCTCTCGCATTGTGCCGATCTCGAAAAACAACAGGCTCTTCGACCATGTGACCTCATCCTCGGGGAACCGAATATGACCAGCACGTCAGATGATTCATAATGCGACTGTCGTAGCACCACCAATATTATCGTTGGTGTTTGCAGGTCGACCGAATAGATAATCGTGGAAGATCAGCAAAGGAGGCTGAGGGTTTTGTTAGGGCATTTGAAG_-_ATGGAAGGCCCCACTGAGATCAGCAGCAATAAAATGTTCGGAGGATTCAACAGGCGATACAAGCACTACAGTCCAACCCTAGGCTGCGATATGACGTTCTCAATTTTCTTTCCTCCAGCTTCAGTGACCAAGAAAGTCCCTGTTCTCTATTGGCTTTCTGGTCTGACTTGCACGGATGAGAATTTCATAATTAAATCTGGAGCTCAACGTGCTGCATCTAAAGAAAGTGTTGCTTTGGTTGCCCCTGACACATCTCCACGAGGTCTAAATGTTGAAGGGGAGTCTGACAGCTGGGATTTTGGTGTAGGTGCTGGATTTTATTTGAATGCTACTCAAAAGAAGTGGGCAAATTGGCGAATGTATGATTATGTTGTGGATGAACTTCCTAAACTGTTAAGTTCCCACTTTAGTCAGCTAGATCCCGCAAATGCATCTATTTTTGGTCATTCAATGGGGGGACACGGAGCTTTGACAGTTTTCTTTAAAAATCAAAATAAATATAAGTCTGTGTCAGCATTTGCACCCATTGTGAATCCCATTGATTGCCCATGGGGTCAGAAGGCGTTCTTGAATTACTTGGGTGATGACAAATCTAGTTGGGAGGAATATGATGCAACTTACCTAGTGAAGAAATGCAATGGTCTGTCAAAAACCATTCTTATTGATCAGGGTGAAGAAGATAAGTTTCTACACAACCAGCTGCTACCCCATAAATTTGAGGAGGCGTGTAAGATAGCTAATGTTCCTTTGACTTTGCGGTTGCAGCCGGGATATGATCATTCATTCTTCTTCATTGCCACCTTTATAGATGAACACATTGAGCATCACTCAAAAGTTCTTCATGCTTCATGA___AAAACTCTGGACGTTTGACATATATAGAGGGAGAGAGGGATCTGGATATTATTGTCATTAGATTATTATGGTTATATTGTGAATAGGTGGCCCATAAGTAGTTTTAAGCTCTAGCATGAGTGGACTTAAAAGAAGCTTTCTTTTAAGTGGGATTACAGTCTACTTTTGTAATGTTTTCTGGTTAAATGATAATCAACCAGGCAAGAATTAATATCAAAGTTATAGTAGTACATATCTATTTCATATTTCTTAATTCGAACGTTACATTATGATGACTTCTTTCTGAATGCATGTTATAGATCTGTACCAACCGAAGGTCACTTACTCCTCTAAGACAGTTTTAGATTTTTCGACGTCCACATTATACGTCGGATTGAAATATAATAGGTCAATTGTACGGTCGTTTTGTAATTAGTTTTGGGAAATGATTATTATAATTTATTAGAGGTTAAATAAATTTGATGATAAATTGATCTAG

Fln Alignment:

sp_v1.1_unigene24745___MEGPTEISSNKMFGGFNRRYKHYSPTLGCDMTFSIFFPPASVTKKVPVLYWLSGLTCTDENFIIKSGAQRAASKESVALVAPDTSPRGLNVEGESDSWDFGVGAGFYLNATQKKWANWRMYDYVVDELPKLLSSHFSQLDPANASIFGHSMGGHGALTVFFKNQNKYKSVSAFAPIVNPIDCPWGQKAFLNYLGDDKSSWEEYDATYLVKKCNGLSKTILIDQGEEDKFLHNQLLPHKFEEACKIANVPLTLRLQPGYDHSFFFIATFIDEHIEHHSKVLHAS
A9NNG6_______________MEGPTEISSNKMFEGFNRRYKHYSPTLGCDMTFSIFFPPASVSKKVPVLYWLSGLTCTDENFIVKSGAQRAASKESVALVAPDTSPRGLNVEGESDSWDFGVGAGFYLNATQGKWANWRMYDYVVDELPKLLSSHFHQLDTANASIFGHSMGGHGALTVFFKNQNKYKSVSAFAPIVNPIDCPWGQKAFLNYLGDNKSSWEEYDATYLVKKCNGLSKTILIDQGEEDKFLHNQLLPHKFEEACKIANVPLTLRLQPGYDHSFFFIATFIDEHIEHHSKALHAS

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
456		11		88	0.923564
758		12		87	0.992554
1272	38	61			1.0
1541	33		66		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain