SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24626

Length: 1059 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24626

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	gpm567; LOC100286154; K03952 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 8 [EC:1.6.5.3 1.6.99.3]	-	-	3.0e-34	68%
FL-Next	sp=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	69%
Blast2go	nadh-ubiquinone oxidoreductase 19 kda subunit family protein	-	-	1.0623e-34	82%

Source	ECs	Term	Type	e value	Identity
AutoFact	NADH dehydrogenase (ubiquinone).	EC:1.6.5.3	-	3.0e-34	68%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Oxidative phosphorylation	00190		3.0e-34	68%
AutoFact	Metabolic pathways	01100		3.0e-34	68%
AutoFact	NADH dehydrogenase.	EC:1.6.99.3	-	3.0e-34	68%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Oxidative phosphorylation	00190		3.0e-34	68%
AutoFact	Metabolic pathways	01100		3.0e-34	68%

Full-Lengther Next Prediction

SNPs (tot: 47)

Position	A %	C %	G %	T %	Probability
38			66	33	0.997452
41	66			33	0.997452
42	66			33	0.997452
81	75			25	0.996473
82	75		25		0.996473
83	75		25		0.996473
84		75	25		0.996473
85			25	75	0.996473
130		80	20		0.995493
131		80	20		0.995493
132		80	20		0.995493
139			83	16	0.994512
140		83	16		0.994512
141	83		16		0.994512
222		34		65	1.0
323	88			11	1.0
325	88		9		1.0
326	88		1	9	1.0
327	88			1	1.0
329	11		88		1.0
332			88	11	1.0
335	88	11			1.0
336		3		96	0.990463
350		1		86	1.0
354		1		94	0.960243
390	1	3	94		0.960243
392	94	3		1	0.960243
395		1	3	94	0.960243
397		5	94		0.999997
398	94	3			0.960243
401	1	94	3		0.960243
402	96		3		0.993591
404	96		3		0.993591
406		3		96	0.993591
409		3	96		0.993591
410	3		96		0.993591
415	96	3			0.984346
422	96			3	0.984346
553	13			86	1.0
566	88		11		1.0
610		3		89	0.998606
718		50	50		1.0
741		12		87	0.992554
782			10	90	0.90298
818	83	16			0.994512
853			80	20	0.995493
854			80	20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain