SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24462

Length: 1172 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene24462 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to fiber protein Fb2	-	-	2.0e-31	46%
FL-Next	sp=Protein DEHYDRATION-INDUCED 19; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	55%
Blast2go	protein	-	-	0.0	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Drought induced 19/ RING finger protein 114	IPR008598	-	0.0	66%

Full-Lengther Next Prediction

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
435		35	64		1.0
463			15	69	0.999985
465		69		15	0.999985
466	7	69	23		1.0
467	16			75	0.99999
469	75			16	0.99999
470		83	16		0.999991
474	84		15		0.999986
475		15	84		0.999986
476	76	15	7		0.999983
478	15			84	0.999986
480	7	76	15		0.999983
481		84		15	0.999986
486	16		83		0.999991
488		83	16		0.999991
496		90	10		0.90298
498			10	90	0.90298
501	10	90			0.90298
504	90		10		0.90298
505	90	10			0.90298
506	90	10			0.90298
509		90	10		0.90298
546		10		90	0.90298
590	90		10		0.90298
737		10		89	0.999919
879		92		7	0.999532
888		7		92	0.999532
1011	88		11		0.999952
1031		21	78		1.0
1033	18		81		0.999994
1064	10	90			0.90298
1065		20	80		0.999996
1067	10		90		0.90298
1068		10		90	0.90298
1071	11			88	0.923564
1072	88		11		0.923564
1079		88	11		0.923564
1113			85	14	0.993533
1117	85	14			0.993533
1118	14			85	0.993533
1121	16			83	0.994512
1125	16		83		0.994512
1126		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain