SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24310

Length: 603 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24310

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ring finger protein, putative	-	-	3.0e-11	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Blast2go	ring finger	-	-	0.0	64%

Source	InterPros	Term	Type	Identity
Blast2go	Zinc finger, RING-type	IPR001841	-	64%
Blast2go	Zinc finger, RING/FYVE/PHD-type	IPR013083	-	64%
Blast2go	Zinc finger, C3HC4 RING-type	IPR018957	-	64%

Full-Lengther Next Prediction

SNPs (tot: 55)

Position	A %	C %	G %	T %	Probability
109		33		66	0.997452
111			33	66	0.997452
112	33	33		33	0.997753
113	66	33			0.997452
114	33	33	33		0.997753
116		33	66		0.997452
119		33	33		0.997753
121	66			33	0.997452
122			33	66	0.997452
124		33		66	0.997452
126		66	33		0.997452
129	33	66			0.997452
131		33		66	1.0
137			66	33	0.997452
164		33	66		0.997452
166			33	66	1.0
194	33		66		1.0
222	33		66		1.0
242	66			33	0.997452
246	33			66	1.0
247		33	66		1.0
253	33		66		0.997452
256		66	33		0.997452
265		33	66		1.0
279	66		33		0.997452
281	57	14	28		1.0
282	85		14		0.993533
285	85			14	0.993533
288		14		85	0.993533
294	57	28	14		1.0
296		14		14	0.984337
297		85	14		0.993533
298	85			14	0.993533
299	85	14			0.993533
301		14	85		0.993533
306		71	28		1.0
313		16		83	0.994512
315		66		33	1.0
333	66			33	1.0
356		20		80	0.995493
357	25		75		0.996473
364	50			50	1.0
369		25	75		0.996473
374	75			25	0.996473
396		50		50	1.0
402		50		50	1.0
408		66		33	0.997452
417		66		33	0.997452
432		33		66	0.997452
435	33		66		0.997452
439		33		66	0.997452
441			66	33	0.997452
449			66	33	0.997452
488	66		33		0.997452
497	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain