SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24222

Length: 1039 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24222

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gibberellin-regulated protein 3 precursor, putative	-	-	2.0e-22	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%
Blast2go	gibberellin-regulated protein 1	-	-	3.09339e-31	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Gibberellin regulated protein	IPR003854	-	3.09339e-31	78%

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
54	66	33			0.997452
56	66			33	0.997452
59	66			33	0.997452
64	66			33	0.997452
65	66			33	0.997452
67		66	33		0.997452
68	66	33			0.997452
69	66			33	0.997452
70			33	66	0.997452
72		33		66	0.997452
73	33		66		0.997452
76		33	66		0.997452
77	33	66			0.997452
176	20		80		0.995493
179			40	60	1.0
180			20	80	0.995493
181		60	20	20	0.99255
182	20	40	40		1.0
183	60	20	20		0.99255
184			20	80	0.995493
185	20		20	60	0.99255
245	72		9	18	0.999994
246	63		9	18	0.999997
248	72	18		9	0.999994
251	81	18			0.999994
252	72			18	0.999994
256		23	76		1.0
258			15	84	0.999986
308	93		6		0.99903
320	95		4		0.99692
339		69		30	1.0
534		96	3		0.999965
551		2		97	0.971188
567	2	97			0.971188
622	2		97		0.999348
745			93	6	0.999264
816		26		73	1.0
817	4	17		78	1.0
883	26		73		1.0
892	71		28		1.0
908		33	66		1.0
910	88		11		0.923564
919	66		33		1.0
928	55			44	1.0
970		55	44		1.0
975		55		44	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain