SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24172

Length: 844 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24172

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chaperone protein dnaJ 11, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9R8A2_RICCO	-	-	2.0e-19	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	dnaj heat shock n-terminal domain-containing protein	-	-	0.0	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to stress	GO:0006950	Biological Process	0.0	60%
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Heat shock protein DnaJ, N-terminal	IPR001623	-	0.0	60%
Blast2go	Heat shock protein DnaJ	IPR003095	-	0.0	60%

Full-Lengther Next Prediction

SNPs (tot: 60)

Position	A %	C %	G %	T %	Probability
215	85		14		0.993533
217			16	83	0.994512
219			16	83	0.994512
220	16	83			0.994512
225		83	16		0.994512
226			16	83	0.994512
227	83	16			0.994512
229			16	83	0.994512
231		16		83	0.994512
232	16	83			0.994512
237	50	50			1.0
283	50		50		1.0
316	33		66		0.997452
336		50	50		1.0
346		85	14		0.993533
347		85	14		0.993533
348	85	14			0.993533
349			85	14	0.993533
352		14	85		0.993533
354		14	85		0.993533
355	85			14	0.993533
356		14	85		0.993533
357	14		85		0.993533
390		14		85	0.993533
391			14	85	0.993533
394	85			14	0.993533
397	85	14			0.993533
399		70	20	10	0.999998
400		40		60	1.0
401		20	80		0.999996
404		70	30		1.0
405	90			10	0.90298
407	80	20			0.999996
408		10		90	0.90298
409	70			30	1.0
410		10	90		0.90298
411	80			20	0.999996
417	75	25			1.0
418	75			25	1.0
419	75	25			1.0
529		16	83		0.999991
579		20		80	0.999996
604		20	80		0.999996
622	87		12		0.992554
650			87	12	0.992554
730	14		14		0.984337
731	83		16		0.994512
815			66	33	0.997452
817	66	33			0.997452
818	66		33		0.997452
819	66	33			0.997452
820	33			66	0.997452
821	66		33		0.997452
824	33			66	0.997452
825	66		33		0.997452
830	33			66	0.997452
831			33	66	0.997452
832			33	66	0.997452
833		33		66	0.997452
835	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain