SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24157

Length: 982 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene24157 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	erwinia induced protein 2	-	-	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	88%
Blast2go	cell part	GO:0044464	Cellular Component	0.0	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	B-cell receptor-associated 31-like	IPR008417	-	0.0	88%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
251		66	33		0.997452
865		11	88		0.999952
868	11		82		0.999919
880	76		23		1.0
913	54	45			1.0
914		45	54		1.0
915		45		54	1.0
916		45	54		1.0
918	63			36	1.0
919	85			14	0.993533
936		33	66		1.0
937	83	16			0.994512
938	83			16	0.994512
939			80	20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain