SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23910

Length: 566 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23910

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF538 domain containing protein	-	-	2.0e-35	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	unknown [Pinus pinaster]	-	-	0.0	90%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF538	IPR007493	-	0.0	90%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
27			47	47	1.0
365	25		75		1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
253	264	AGA AGA AGA AGA	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain