SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23874

Length: 896 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23874

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9RDX1_PHYPA	-	-	2.0e-20	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	protein transport protein sec61 gamma subunit	-	-	2.05879e-22	96%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein transport	GO:0015031	Biological Process	2.05879e-22	96%

Full-Lengther Next Prediction

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
39	33			66	0.997452
40	33		66		0.997452
41			66	33	0.997452
42		33	66		0.997452
43			66	33	0.997452
62		87	12		0.999964
63			25	75	1.0
64			87	12	0.999964
66	88		11		0.999937
67	83		5	11	0.999887
70		11	88		0.999937
71		11	88		0.999937
74			11	88	0.999937
75	88		11		0.999937
80	3		12	84	1.0
82		93	6		0.999153
83	6		93		0.999153
111	74			25	1.0
123		74	25		1.0
298			90	7	0.999998
299			85	14	1.0
300		90	9		1.0
301	92		7		0.999999
302	87	12			1.0
303		4		95	0.999979
304	4			95	0.999981
305		8	91		1.0
306	4	1	92	1	0.999649
307	2			86	1.0
310	1	1		91	1.0
311		2	97		0.979771
610		5		51	1.0
663		11		88	0.999952
719		50	50		1.0
827		25		75	0.996473
834		33	66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain