SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23516

Length: 631 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23516

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	phosphatidic acid phosphatase, putative (EC:1.3.1.74)	-	-	6.0e-18	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%
Blast2go	phosphatidic acid	-	-	4.86777e-25	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphatidate phosphatase.	EC:3.1.3.4	-	4.86777e-25	77%

Source	KEGGs	Term	e value	Identity
Blast2go	Glycerolipid metabolism	00561	4.86777e-25	77%
Blast2go	Glycerophospholipid metabolism	00564	4.86777e-25	77%
Blast2go	Ether lipid metabolism	00565	4.86777e-25	77%
Blast2go	Sphingolipid metabolism	00600	4.86777e-25	77%
Blast2go	Metabolic pathways	01100	4.86777e-25	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular response to phosphate starvation	GO:0016036	Biological Process	4.86777e-25	77%
Blast2go	phosphatidate phosphatase activity	GO:0008195	Molecular Function	4.86777e-25	77%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	4.86777e-25	77%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
95		60		40	1.0
96			20	80	0.995493
98		20	60	20	0.99255
99	20		80		0.995493
100	40	40		20	1.0
101	20		20	60	0.99255
102	20		40	20	0.994159
103		60		40	1.0
105	80			20	0.995493
106	40	40		20	1.0
107			20	80	0.995493
108		80	20		0.995493
109	80	20			0.995493
111	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain