SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23205

Length: 1885 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23205

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Serine/threonine-protein kinase SRK2E n=5 Tax=rosids RepID=SRK2E_ARATH	-	-	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	protein	-	-	89%

Source	GOs	Term	Type	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	89%
Blast2go	response to salt stress	GO:0009651	Biological Process	89%
Blast2go	defense response to bacterium	GO:0042742	Biological Process	89%
Blast2go	growth	GO:0040007	Biological Process	89%
Blast2go	sucrose metabolic process	GO:0005985	Biological Process	89%
Blast2go	regulation of stomatal movement	GO:0010119	Biological Process	89%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	89%
Blast2go	unsaturated fatty acid biosynthetic process	GO:0006636	Biological Process	89%
Blast2go	triglyceride biosynthetic process	GO:0019432	Biological Process	89%
Blast2go	leaf development	GO:0048366	Biological Process	89%
Blast2go	protein kinase activity	GO:0004672	Molecular Function	89%
Blast2go	protein binding	GO:0005515	Molecular Function	89%
Blast2go	cytosol	GO:0005829	Cellular Component	89%
Blast2go	nucleus	GO:0005634	Cellular Component	89%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ACL3

Fln msg:

Fln protein: MDGAPFAEGSSTFPSAMDIMPIMHDSDRYELVKDIGSGNFGVARLMRDRQTRELVAVKYIERGENIDENVKREIINHRSLRHPNIIQFKEVILTPTHLAIVMEYAAGGELYERICNAGRFREDEARFFFQQLISGVSYFHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPNSTVGTPAYIAPEVLSKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIGRIMSAQYCIPDHITSECRHLLSRIFVANPVMRITMTEIQNHEWFLKNLPADLLDAHTSNQYDCADQPAQSTAEIMRIIDEAKIPALGSGLEQYFGDGLDSDDMDLDDDADLDDDSSGESVYAM*

Protein Length: 364

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTAATTTATTTTTTCACACCTGTTCAAGGATGCTCCACCCTATTGCTCTCTTGCTTGCATGATGATTATTCAAATAATCTATTCGAATCTTCCCTTTTACTTAATATTAACGTCGTGACCTTGGCTGTCACTCAATTTCTCGGTCATTCTTACATCTGTTCAGGACCTTTTCTTCTCTCATATCTTTTTATCGTCTTCACAGCAGAACCTAATCTGTATTGGCATTTTGGTCATAATCCAATCCGTACCAGGTTATGGATTGGATTTGAAGAGAATAGCAGAGAAACAGAGGACGAGGGCATTTGGGCTGAAGGATGCGAGACTTTTTTTTTCTTTGTGGAGGAGATTGAAAAGCAATAATA_-_ATGGATGGAGCGCCGTTTGCTGAAGGTTCATCAACATTTCCGTCAGCCATGGATATTATGCCAATCATGCACGATAGCGATCGATATGAGCTCGTTAAAGATATTGGGTCAGGCAATTTCGGTGTAGCGCGCTTAATGCGCGACAGACAGACCAGGGAACTCGTTGCTGTCAAATACATTGAGCGGGGCGAAAATATTGATGAAAACGTGAAAAGAGAGATCATCAATCACCGCTCGCTTCGCCATCCAAACATTATTCAATTCAAAGAGGTGATATTGACTCCGACCCATCTAGCAATTGTTATGGAATATGCTGCAGGGGGTGAGCTGTATGAACGCATTTGCAATGCAGGCCGTTTTAGGGAGGATGAGGCACGTTTTTTCTTTCAGCAACTTATTTCAGGTGTAAGCTATTTCCATTCTATGCAAGTCTGTCACCGTGATTTAAAGCTGGAAAATACTCTTTTGGATGGAAGTCCTGCACCTCGTCTCAAGATCTGTGATTTTGGCTATTCCAAGTCTTCTGTGCTTCATTCACAGCCCAACTCAACTGTTGGGACACCTGCATACATAGCTCCAGAAGTTTTGTCCAAGAAAGAATATGATGGAAAGATTGCAGATGTATGGTCGTGCGGTGTGACTCTTTATGTTATGCTTGTAGGAGCATATCCATTTGAGGATCCTGAGGAACCAAAGAATTTTCGCAAGACCATTGGCCGTATAATGAGTGCGCAATATTGCATACCAGATCACATTACATCCGAATGTCGGCACTTGCTTTCTAGAATTTTTGTTGCAAATCCTGTCATGCGAATAACAATGACTGAAATTCAGAATCACGAGTGGTTTTTGAAGAATTTGCCTGCAGACTTGTTGGATGCTCATACTAGCAATCAATACGATTGTGCAGACCAACCTGCACAGAGCACTGCCGAGATTATGAGAATTATTGATGAAGCAAAAATTCCTGCATTGGGGTCAGGGTTAGAGCAATATTTTGGAGATGGTCTTGATTCCGATGACATGGATCTGGATGATGACGCTGACCTCGATGATGATAGCAGTGGGGAGTCTGTTTATGCTATGTAA___GACCGTTTTTAGAGATTTTTCAGTGGATAGATGACATCTTTGATTTCTGCATAATAGGAGGATTTATAGAAGTTATTCCTCCCGTCTGCTGGCTTATCTCTCTGTGCCAAGGTATATAATTAACCGCTATATGTACTGGATTGGACTATGAAAGCACTAGCTTTGTTCCAGTACAAGCAGCAGTAGCTGATGTAAGAGATCTATCTGAGGCCAGGATGGCCTGATGTAAAGTATGGTGTGAATCGTGATGTTTCAAACTCTTCCTTGCAGAGGGAAACATGCTAGAGATGTAAATTTATATACAGGATTTCCCTGTTATGGGAATACGTGCATGCTATTTTTATACTTTAACTTTATCGGAATTATTGATTAGAATATATGGATTCCAATGTTGTAGGGATATTCAATGG

Fln Alignment:

sp_v1.1_unigene23205___MDGAPFAEGSSTFPSAMDIMPIMHDSDRYELVKDIGSGNFGVARLMRDRQTRELVAVKYIERGENIDENVKREIINHRSLRHPNIIQFKEVILTPTHLAIVMEYAAGGELYERICNAGRFREDEARFFFQQLISGVSYFHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPNSTVGTPAYIAPEVLSKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIGRIMSAQYCIPD--HITSECRHLLSRIFVANPVMRITMTEIQNHEWFLKNLPADLLDAHTSNQYDCADQPAQSTAEIMRIIDEAKIPALGSGLEQYF
D5ACL3_______________MDRGPFAEGSSTFPSAMDIMPIMHDSDRYELVKDIGSGNFGVARLMRDRQTRDLVAVKYIERGENIDENVKREIINHRSLRHPNIIQFKEVILTPTHLAIVMEYAAGGELYERICNAGRFSEDEARFFFQQLISGVSYFHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPNSTVGTPAYIAPEVLSKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIGRIMSAQYCIPDFVHITSECRHLLSRIFVANPIMRITMTEIQNHEWFLKNLPADLLDAHTSNQYDSADQPAQSTAEIMRIIDEAKIPALGSGLEQYF

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
155	18	81			0.999994
159	72	18	9		0.999994
161	30			20	1.0
185			27	72	1.0
1649	37		62		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain