SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23188

Length: 1483 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23188

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	HSA32; HSA32 (HEAT-STRESS-ASSOCIATED 32); catalytic	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	protein	-	-	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	heat acclimation	GO:0010286	Biological Process	0.0	77%

Source	InterPros	Term	Type	Identity
Blast2go	(2R)-phospho-3-sulpholactate synthase, ComA	IPR003830	-	77%
Blast2go	Aldolase-type TIM barrel	IPR013785	-	77%
Blast2go	Peptidase S8, subtilisin-related	IPR015500	-	77%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NRE7

Fln msg:

Fln protein: MRESRMAWLARNHFFEDEDEERPEKPRYYGLTEIRAPSYSLTDPTRLEDILEAMGQFVDGLKFAGGTCSLMPKTFIKEITEMAHKHKVNVGTGDWAELLLQKGPSGFKQYVQECKDLGFDIIDLNADSLKVPEETLLRLIRIIKNERLKAKPLFGINFEKSAIPSKDDRAFGAYIAPTPKGSEMIEDVELLIRKAERCLEAGADMIMIDADGISGRADTLRTDAIAKIIGRLGLEKTMFEAASPDTFEWFVRRYGSRVNLFVDHSHVGKLECFRSGALGMNPSSISRSRRLGPALFY*

Protein Length: 299

Fln nts: CAGAGTACATGGGGAACCACCGGATTCAAAATAAAACCCAACCGGAAAAAGCACAAAGCTTTTTGATAAAGATTAAGATGACACGTGGTCAAGGATGACAAAGATCAGAACGTCTTTCATGGGCGTTTCTGGAAGCCACCAGACTCTCTCATCTCAAATAATTGACATCACCTCTATAACGACCGCCCTGTGAATGTGAATAGGTTTTAAGTTTTCGATTTCATCTCAGAATAACTGGAGCATTTGTACATTCCAGTTTGA_-_ATGCGCGAATCGAGGATGGCATGGTTGGCAAGAAATCATTTCTTCGAAGACGAAGATGAAGAAAGGCCAGAGAAGCCTCGCTATTATGGACTCACAGAAATCAGAGCCCCTAGTTATTCTTTAACGGACCCTACCCGCCTCGAGGACATTCTCGAAGCAATGGGGCAATTTGTTGATGGCTTGAAGTTTGCAGGAGGGACTTGCAGTTTGATGCCTAAAACATTTATTAAAGAGATCACGGAAATGGCACACAAGCACAAAGTGAATGTGGGTACAGGCGATTGGGCGGAGCTTTTACTTCAGAAGGGCCCTAGCGGTTTTAAACAGTATGTTCAGGAATGTAAAGATCTGGGTTTCGATATCATAGATTTAAATGCTGATTCACTCAAAGTTCCTGAAGAAACTCTCTTGCGACTTATTCGGATAATAAAGAATGAGAGGCTAAAAGCAAAACCTCTATTTGGTATAAATTTTGAGAAATCGGCTATACCATCGAAGGACGACAGAGCATTTGGGGCTTATATTGCTCCCACTCCAAAGGGATCAGAAATGATTGAAGATGTGGAGTTATTAATTAGAAAGGCGGAGAGATGTTTGGAGGCTGGAGCAGATATGATCATGATTGATGCAGATGGTATAAGTGGCCGTGCTGACACGTTGCGCACTGATGCTATAGCAAAAATAATTGGGCGGTTGGGACTAGAGAAGACTATGTTTGAAGCGGCTAGTCCAGACACATTTGAGTGGTTTGTCAGAAGATATGGATCAAGGGTGAATCTCTTTGTGGATCATTCACATGTGGGGAAATTGGAGTGTTTTCGAAGTGGGGCACTTGGTATGAACCCAAGCTCTATATCTCGTAGCCGCAGGCTCGGGCCAGCACTATTTTACTAG___ACATACTTGGAAATGGACGAACAACAATGGAACAGTTACTGGATTTTATTATGCTTGAAAGGATAAAAATAATAATATAAACCACACACGGTTAAGGAGTGTTTGTTTTCGGCATTTCAATGCCTTTGACACACGTTATGTTTGCCGAGAATTATATATACTGTGATTCTAAACCATGATATCATGTTTTATTAAAAAATGTGAGAGCATGCTGTTGTATGCTAGGATTATCTAATTGCCCAACCTTGTAAAGCTTTCCAGCAGTTTATATGCAGGACACTGTCATCTGTTCTTTTTTCTTTCACATGATTGTTTTCAATCTGGCTCA

Fln Alignment:

sp_v1.1_unigene23188___MAWLARNHXXXXXXXXXXXXXXXXGLTEIRAPSYSLTDPTRLEDILEAMGQFVDGLKFAGGTCSLMPKTFIKEITEMAHKHKVNVGTGDWAELLLQKGPSGFKQYVQECKDLGFDIIDLNADSLKVPEETLLRLIRIIKNERLKAKPLFGINFEKSAIPSKDDRAFGAYIAPTPKGSEMIEDVELLIRKAERCLEAGADMIMIDADGISGRADTLRTDAIAKIIGRLGLEKTMFEAASPDTFEWFVRRYGSRVNLFVDHSHVGKLECFRSGALGMNPSSISRSRRLGPALFY
A9NRE7_______________MAMFARNHFFEDEDEERPEKPRHYGLTEIRAPSYSITDLTRLEGILEAMGQFVDSLKFAGGTCSLMPKTFIKEITEMAHRHKVNVGTGDWAELLLQKGPSGFKQYVQECKDLGFDVIDLNADSLEVPEETLLRLIRIIKNERLKAKPLFGINFERSAIPSKEDRAFGAYIAPTPKGSEMIEDVELLIRKAERCLEAGADMIMIDAEGISGRADMLRTDAIAKIIGRLGLEKTMFEAASPETFEWFVRRYGSRVNLFVDHSHVGKLECFRSGALGMNPSSITRSRRLGPAIFF

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
386	50			50	1.0
521		50		50	1.0
605		16		83	0.994512
608	83	16			0.994512
609	83		16		0.994512
610	83			16	0.994512
613		16		83	0.994512
616			83	16	0.994512
619		16		83	0.994512
625		16		83	0.994512
743	33		66		1.0
766		33		66	1.0
883		33		66	1.0
1397			75	25	1.0
1407	21		78		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain