SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23170

Length: 487 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23170

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	hydrophobic protein, putative / low temperature and salt responsive protein, putative	-	-	5.0e-18	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	60%
Blast2go	stress-induced hydrophobic peptide	-	-	1.05115e-18	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	hyperosmotic salinity response	GO:0042538	Biological Process	1.05115e-18	92%
Blast2go	cell part	GO:0044464	Cellular Component	1.05115e-18	92%

Full-Lengther Next Prediction

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
347	62	37			1.0
446	47		52		1.0
462	60	40			1.0
463			40	60	1.0
466	40	60			1.0
467			50	50	1.0
469	25	25	50		0.995533
470	75			25	0.996473
471	25		50	25	0.995533
472	25			75	0.996473
473		50	50		1.0
474	50		25	25	0.995533
475		75		25	0.996473
479		66		33	0.997452
480		66	33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain