SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23169

Length: 1132 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23169

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PtrAMT1-4; ammonium transporter	-	-	2.0e-21	65%
FL-Next	sp=Ammonium transporter 1 member 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).	-	-	0.0	67%
Blast2go	ammonium transporter	-	-	6.72737e-22	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to nematode	GO:0009624	Biological Process	6.72737e-22	74%
Blast2go	methylammonium transport	GO:0015843	Biological Process	6.72737e-22	74%
Blast2go	ammonium transport	GO:0015696	Biological Process	6.72737e-22	74%
Blast2go	ammonium transmembrane transporter activity	GO:0008519	Molecular Function	6.72737e-22	74%
Blast2go	plasma membrane	GO:0005886	Cellular Component	6.72737e-22	74%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ammonium transporter	IPR001905	-	6.72737e-22	74%
Blast2go	Ammonium transporter AmtB-like	IPR024041	-	6.72737e-22	74%

Full-Lengther Next Prediction

SNPs (tot: 54)

Position	A %	C %	G %	T %	Probability
389			91	8	1.0
390		8		91	1.0
391			8	91	1.0
394	8			91	1.0
395	91	8			1.0
400	91	8			1.0
402			8	91	1.0
405	8			91	1.0
408		91		8	1.0
409		8	91		1.0
410	8		91		1.0
465		93	6		0.999999
466	6		2	90	0.999997
467		6		93	0.999999
469	90			9	1.0
470	90		2	6	0.999997
471	93		6		0.999999
479	6			93	0.999999
480		6	2	90	0.999997
509		3	6	89	0.998304
510		6		93	0.999453
511	6			93	0.999453
512	89		10		1.0
513	89		3	6	0.998304
514	89	3	6		0.998304
516		89	10		1.0
518		86	6	6	0.995852
519	6	3	89		0.998304
520		6		93	0.999453
522			6	93	0.999453
523			6	93	0.999453
524		6		93	0.999453
935		75		25	0.996473
1022			75	25	0.996473
1024			25	75	0.996473
1026	25			75	0.996473
1027			25	75	0.996473
1028		75		25	0.996473
1029			25	75	0.996473
1030	25	75			0.996473
1033	25		75		0.996473
1034	25	75			0.996473
1036	25			75	0.996473
1037			25	75	0.996473
1040		75	25		0.996473
1041		33		66	0.997452
1042	33	66			0.997452
1045		66	33		0.997452
1046	33			66	0.997452
1047			33	66	0.997452
1048		66		33	0.997452
1050	33	66			0.997452
1053			33	66	0.997452
1056	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain