SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene22982

Length: 1756 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene22982

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Purple acid phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RHA3_RICCO	-	-	73%
FL-Next	sp=Purple acid phosphatase 2; Ipomoea batatas (Sweet potato) (Convolvulus batatas).	-	-	71%
Blast2go	purple acid phosphatase	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	83%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	83%
Blast2go	Riboflavin metabolism	00740		0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	83%
Blast2go	manganese ion binding	GO:0030145	Molecular Function	83%
Blast2go	extracellular space	GO:0005615	Cellular Component	83%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	83%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9SDZ9

Fln msg:

Fln protein: MAPIKQFLLVFILAGLIVCMSAEDGVTSRYVRRLQASVDMPMDSDVFQVPPGYNAPQQVHITQGDHVGRSVIVSWVTPSEPGSSTVLYGPENNKYKYEAKGRLTRYKFYNYTSGYIHHCTLRGLEFDTKIFYKIGVGNATREFSFTTPPKPGPDTPYTFGIIGDLGQTFDSNKTFHHYMKTNGQAVLFVGDLSYADHYPFDDNRRWDTWGRFTEKSAAYQPWIWTAGNHEIEFHPEFGEKMPFKPYTHRYHVPYRSSNSTAPFWYSIKRASTYIIVLSSYSAYGQYTPQYKWLAEEFPKVNRKETPWLIVLMHSPWYNSNNYHYMEGESMRVQFESWFIKYKVDIVFAGHVHAYERSKRVSNVAYDIVNGKCTPVFDPSSPVYITIGDGGNIEGLAANFTEPQPKYSAFREASFGHAVLEIKNRTHAFYHWHRNQDGDAVVADSQWFYNRYWYPHNESTSAS*

Protein Length: 464

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTGTTTGGTCTGCAAAGTGGCAGGA_-_ATGGCACCAATCAAACAGTTCTTATTGGTGTTTATATTGGCGGGGTTGATTGTTTGCATGTCAGCTGAAGATGGAGTTACCAGTAGATATGTACGGAGGCTTCAGGCATCTGTGGATATGCCCATGGACAGTGATGTTTTCCAGGTTCCCCCAGGTTACAATGCTCCTCAACAGGTTCATATCACTCAAGGAGATCATGTAGGTAGATCAGTTATTGTGTCATGGGTTACACCATCAGAGCCTGGATCCAGTACTGTTTTATATGGCCCTGAAAATAATAAGTACAAGTATGAAGCAAAAGGTCGTCTGACCAGATATAAGTTCTACAACTATACATCAGGATATATTCATCACTGCACTCTGAGGGGTCTGGAGTTTGACACTAAAATTTTCTATAAGATTGGAGTGGGAAACGCAACAAGAGAGTTTTCGTTCACAACTCCTCCAAAACCTGGTCCTGACACTCCATATACTTTCGGGATTATTGGTGATCTTGGTCAGACATTTGACTCGAACAAGACCTTCCATCATTATATGAAAACAAATGGACAGGCTGTTCTGTTTGTGGGAGACCTGTCTTACGCAGATCACTACCCATTCGATGACAATAGGAGATGGGACACATGGGGAAGATTTACCGAGAAAAGCGCAGCTTACCAACCTTGGATATGGACTGCAGGAAACCATGAGATTGAGTTTCATCCTGAATTTGGAGAAAAAATGCCATTCAAACCATACACACACCGCTACCATGTTCCATATCGTTCCTCAAACAGTACAGCCCCCTTTTGGTATTCAATTAAGCGCGCATCGACCTACATAATCGTCCTATCCTCATACTCAGCATACGGACAATATACCCCCCAGTACAAGTGGCTTGCGGAGGAGTTTCCAAAGGTTAACAGAAAAGAGACTCCATGGCTGATTGTGCTCATGCACTCCCCATGGTACAACAGCAACAACTACCATTACATGGAAGGAGAGTCTATGCGAGTCCAATTTGAATCATGGTTTATAAAATACAAAGTTGATATTGTCTTTGCTGGTCACGTTCATGCTTATGAGAGATCTAAACGTGTATCAAATGTTGCCTACGACATAGTGAACGGGAAGTGTACGCCAGTATTTGATCCATCTTCGCCTGTTTACATTACTATTGGTGATGGAGGAAATATTGAAGGCCTCGCAGCCAACTTTACTGAACCACAACCCAAATATTCAGCATTTCGGGAAGCTAGTTTTGGCCACGCAGTCCTGGAAATTAAGAACCGGACACATGCTTTCTACCACTGGCATCGCAATCAAGATGGAGATGCTGTAGTTGCCGACTCCCAATGGTTTTATAACAGATATTGGTATCCCCACAATGAGTCAACATCAGCAAGCTAG___GATTTCTCAATTGTTTGACAGTATCTAAATGAATTGGATATGCTGGCAAGTACAGTTAGGAATTGTGTTGTGGCCACTATTGATCAATAACTGTTCATATGATGCTGCAGTAGCAAGTACAGTTAGGAATTGTGTTGTGGCCACTGTTGATCAATAATCGTTCATATGATGTTGCAGTAGCCCTGTAGATCCCATGGTCAATGCTACTTGGCTGGCTTTTATTTGTTTTAGACATGAAATAACAAACATCAGTTTGACTACAATCTTTTTGAGATTCATGGCTACAAAAATAAAGTTCTTTTGACATTCATGGCTAC

Fln Alignment:

sp_v1.1_unigene22982___FLLVFILAGLIVCMSAEDGVTSRYVRRLQASVDMPMDSDVFQVPPGYNAPQQVHITQGDHVGRSVIVSWVTPSEPGSSTVLYGPENNKYKYEAKGRLTRYKFYNYTSGYIHHCTLRGLEFDTKIFYKIGVGNATREFSFTTPPKPGPDTPYTFGIIGDLGQTFDSNKTFHHYMKT--NGQAVLFVGDLSYADHYPFDDNRRWDTWGRFTEKSAAYQPWIWTAGNHEIEFHPEFGEKMPFKPYTHRYHVPYRSSNSTAPFWYSIKRASTYIIVLSSYSAYGQYTPQYKWLAEEFPKVNRKETPWLIVLMHSPWYNSNNYHYMEGESMRVQFESWFIKYKVDIVFAGHVHAYERSKRVSNVAYDIVNGKCTPVFDPSSPVYITIGDGGNIEGLAANFTEPQPKYSAFREASFGHAVLEIKNRTHAFYHWHRNQDGDAVVADSQWFYNRYWYPHNESTS
Q9SDZ9_______________YLLAVVLAA--VMNAAIAGITSSFIRKVEKTVDMPLDSDVFRVPPGYNAPQQVHITQGDHVGKAMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNTKYYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIVNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGHATLDIKNRTHAYYSWHRNQDGYAVEADSMWVSNRFWHPVDDSTT

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
521	85		14		0.993533
548		12		87	0.992554
642		85	14		0.993533
728	14			85	0.993533
861			90	10	0.90298
869		40		60	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain