SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene22493

Length: 1868 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene22493

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Mitochondrial phosphate transporter n=1 Tax=Paeonia suffruticosa RepID=A8TU59_PAESU	-	-	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	mitochondrial phosphate transporter	-	-	91%

Source	GOs	Term	Type	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	91%
Blast2go	plasma membrane	GO:0005886	Cellular Component	91%
Blast2go	cell wall	GO:0005618	Cellular Component	91%
Blast2go	chloroplast	GO:0009507	Cellular Component	91%
Blast2go	mitochondrion	GO:0005739	Cellular Component	91%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Mitochondrial substrate/solute carrier	IPR018108	-	0.0	91%
Blast2go	Mitochondrial carrier domain	IPR023395	-	0.0	91%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NUZ6

Fln msg:

Fln protein: MAMAISEQDTRSLIPSFLYSPSSSSLSHLRGGSFVSETLMNRNRNPLLNLNSTRNSAENVSANANDPKTFVVPAPSEPGKIAMYSPAFYAACTMGGILSCGLTHTGVTPLDLVKCNMQIDPVKYKSISTGFGVLLKEQGAKGLFRGWVPTLLGYSAQGACKFGFYEYFKKYYSDIAGPEYTAKYKTLIYLAGSASAEFIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGYLGLYKGIGPLWGRQIPYTMMKFASFETIVELIYKHAVPLPKDQCSKPLQLGVSFAAGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKMGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPPAAELKELNKLS*

Protein Length: 389

Fln nts: ATGGGGATTATTTATAATAAATAAAAAGAGGCAACGCTGAATCCCTTCTAAAAAACCTAGCCAAACACAGGGCAGGAGGAAGGTGTGCAGAGGCAACCATCCTTCTCTCGTGTATTCGATCCATCCCTGTGTTACATCGATCGATCGAATCC_-_ATGGCCATGGCGATCTCAGAGCAAGACACCCGATCTCTGATTCCAAGCTTTCTTTACTCCCCATCTTCTTCTTCTTTGAGCCATCTCAGAGGAGGTTCGTTTGTATCAGAGACTCTTATGAACAGAAACAGGAATCCTCTGTTGAATCTCAACAGCACCCGGAATTCTGCAGAAAATGTAAGTGCCAACGCTAATGATCCTAAGACATTTGTCGTGCCGGCGCCCAGCGAGCCGGGGAAAATCGCTATGTATTCCCCGGCCTTCTATGCAGCCTGTACCATGGGAGGCATTCTCAGCTGCGGTCTCACCCACACAGGCGTAACCCCTCTGGATCTCGTCAAATGCAATATGCAGATTGACCCTGTGAAATACAAGAGCATCTCCACTGGTTTCGGTGTTTTGCTTAAAGAACAAGGAGCAAAGGGTTTATTCAGAGGCTGGGTGCCAACTCTTCTTGGATATAGTGCTCAGGGCGCTTGCAAGTTTGGCTTTTATGAGTACTTTAAGAAGTACTACTCAGACATTGCAGGGCCTGAGTATACTGCCAAATACAAGACATTGATCTACTTGGCAGGATCTGCATCTGCAGAATTTATTGCTGATATTGCCCTTTGTCCTTTTGAGGCTGTAAAAGTTAGAGTACAAACACAACCTGGCTTTGCTAGAGGATTATCTGATGGACTTCCAAAATTTGTTAGATCAGAAGGATATCTTGGTCTGTACAAAGGTATTGGTCCACTTTGGGGACGCCAAATTCCTTACACCATGATGAAGTTTGCATCCTTTGAAACCATAGTAGAGTTGATCTACAAGCATGCAGTTCCCCTTCCCAAGGACCAATGTAGCAAACCTCTACAACTGGGAGTGAGTTTTGCAGCAGGATATATTGCTGGTGTCTTCTGTGCAATTGTTTCACACCCTGCAGATAACTTGGTCTCTTTCCTAAACAATGCTAAGGGTGCTACCGTTGGTGATGCTGTGAAGAAGATGGGTGTTGTTGGTCTCTTTACTCGTGGTCTTCCTTTGCGTATTGTTATGATTGGAACACTTACTGGAGCACAATGGGGTATCTATGATGCATTCAAGGTGTTCGTTGGCCTGCCGACTACTGGTGGAGTTACACCCCCTGCTGCGGAACTCAAGGAACTGAACAAACTGAGCTAA___TTTGGAGAAGGCCTTCTTGAGATCAAAGTTTAATGCTTAAAGTTTGTCCTGCAGCACAGAAGTTAGACATGGCTGAATAAAAGACCATGGAGGGTTGACTCTAGATTTTTGTTTCTTCCGAATTTAGGCTGATTCACACAGCTTGCAAGTGCTCGTGCAAGTCTTATTTTTTGAGGTTAATATTTTGTTAAAACGATTTTTTCCATCCATTCAGACCTAAATTATAATTCCAAAGTTACATGGCATAATCTCTGGTATACCTTTGATTAATTTTGGTTTGGGATATGGCTAACCAACTTGTTGGGGTAATTTAGCTTCCCTTCGTTTAGATGTTATTGGGAGTAGCTTCTATGCTCTTAGTTCTTAGAGAATTGACATGATAATAAAAAGGCATTCTCAGTTTTGCTTTTAGATGGCATTAGTCTTGGAATATATTTTGAGAAATATCCTATAGGATGACAGCTGATGGTCACGTTGAAATGATAGTCATGTGGAAAACTTAAGTGAAAGATAACTGTGATATCTTTGTTTGTAAATAAGAGTTTATGGCTA

Fln Alignment:

sp_v1.1_unigene22493___MAMAISEQDTRXXXXXXXXXXXXXXXXXXXXXXXVSETLMXXXXXXXXXXXXXXXSAENVSANANDPKTFVVPAPSEPGKIAMYSPAFYAACTMGGILSCGLTHTGVTPLDLVKCNMQIDPVKYKSISTGFGVLLKEQGAKGLFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYTAKYKTLIYLAGSASAEFIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGYLGLYKGIGPLWGRQIPYTMMKFASFETIVELIYKHAVPLPKDQCSKPLQLGVSFAAGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKMGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPPAAELKE
A9NUZ6_______________MAMAISEQDSRSLLPSFLYSPSSSSLSHLRGGSFVSETLLNRNRNPLLNLNSTRSSAENVSANANAPKAFVVPAPSEPGKIAMYSPAFYAACTMGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISTGFGVLLKDQGAKGLFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEFIADIALCPFEAVKVRVQTQPGFAKGLSDGLPKFVRSEGVLGLYKGIGPLWGRQIPYTMMKFASFETIVELIYKNAVPKPKDQCSKPLQLGVSFAAGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKMGVLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPPAVELKE

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
376		88		11	0.923564
454			75	25	0.996473
455			75	25	0.996473
458			25	75	0.996473
461		75	25		0.996473
462		75		25	0.996473
463		75	25		0.996473
465		75	25		0.996473
1712	15			84	0.999986
1714		84		15	0.999986

SSRs (tot: 2)

Start position	End position	Sequence	Length
136	148	ATCG ATCG ATCG A	13
216	228	TCT TCT TCT TCT T	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain