SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene22305

Length: 905 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene22305

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO	-	-	2.0e-23	80%
FL-Next	tr=Nuclear protein skip, putative; Ricinus communis (Castor bean).	-	-	0.0	80%
Blast2go	nuclear protein	-	-	3.23581e-23	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to mannitol stimulus	GO:0010555	Biological Process	3.23581e-23	86%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	3.23581e-23	86%
Blast2go	response to salt stress	GO:0009651	Biological Process	3.23581e-23	86%
Blast2go	transcription activator activity	GO:0016563	Molecular Function	3.23581e-23	86%
Blast2go	nucleolus	GO:0005730	Cellular Component	3.23581e-23	86%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
161		33		66	0.997452
163	66			33	0.997452
164	66	33			0.997452
166			66	33	0.997452
167	66		33		0.997452
169	66	33			0.997452
170		33	66		0.997452
176	66		33		0.997452
177	66	33			0.997452
178			66	33	0.997452
180	66			33	0.997452
181		33	66		0.997452
182	33		66		0.997452
714			18	81	0.999994
727		90	10		0.90298
729	90			10	0.90298
730		10		90	0.90298
769		11		88	0.923564
866		33		66	0.997452
867		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain