SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene22232

Length: 745 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene22232

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Alpha-amylase/subtilisin inhibitor precursor, putative	-	-	3.0e-18	33%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	tumor-related protein	-	-	0.0	51%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Proteinase inhibitor I3, Kunitz legume	IPR002160	-	0.0	51%
Blast2go	Kunitz inhibitor ST1-like	IPR011065	-	0.0	51%

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
53	80		20		0.995493
58			20	80	0.995493
62		20		80	0.995493
67	80		20		0.995493
75	80			20	0.995493
76	80	20			0.995493
105		80	20		0.995493
127	20		80		0.995493
176		66		33	0.997452
268	33		66		0.997452
283	33		66		0.997452
289	33			66	0.997452
410			14	85	0.993533
420	14		85		0.993533
459		11	88		0.999937
462	83		5	11	0.999887
463	83	5	11		0.999887
466		11		88	0.999937
472			11	88	0.999937
474			88	11	0.999937
478	88	11			0.999937
480	11			88	0.999937
540		92	8		0.999718
541	88			12	1.0
546		12	88		1.0
548		4	88	8	0.999262
550			8	92	0.999718
555			92	8	0.999718
556		8	92		0.999718
558		8	92		0.999718
609		19	80		1.0
640		20	79		1.0
651	14			85	1.0
693	47	52			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain