SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene22207

Length: 720 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene22207

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%
Blast2go	binding protein	-	-	6.77212e-38	67%

Full-Lengther Next Prediction

SNPs (tot: 24)

Position	A %	C %	G %	T %	Probability
220	80			20	0.995493
221	80		20		0.995493
222	80		20		0.995493
223	80		20		0.995493
261			20	50	1.0
262	10			20	0.999998
264			10	90	0.90298
265		10		90	0.90298
278	33		66		1.0
294		90	10		0.90298
295	90		10		0.90298
298	10		90		0.90298
380	10		90		0.90298
384		90		10	0.90298
396			90	10	0.90298
397		90	10		0.90298
399	60	40			1.0
400		10		90	0.90298
409	90	10			0.90298
447	66		33		1.0
489	20		80		0.995493
539	25	75			0.996473
542		75	25		0.996473
543	75		25		0.996473

SSRs (tot: 1)

Start position	End position	Sequence	Length
648	661	GCT GCT GCT GCT GC	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain