SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21995

Length: 1100 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene21995

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative; K10745 ribonuclease H2 subunit C	-	-	5.0e-34	44%
FL-Next	tr=Putative uncharacterized protein; subsp. trichocarpa).	-	-	0.0	50%
Blast2go	protein	-	-	7.80567e-36	61%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ribonuclease H2, subunit C	IPR013924	-	7.80567e-36	61%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
105			90	10	0.90298
106		90	10		0.90298
107	90		10		0.90298
109		90	10		0.90298
114	85		14		0.999981
161		50		50	1.0
264		8		91	0.999766
363	45			54	1.0
375		41	58		1.0
498		14		85	0.993533
499	85			14	0.993533
500		14		85	0.993533
520	87		12		0.992554
521		87		12	0.992554
523	87		12		0.992554
525		87	12		0.992554
526	12	87			0.992554
528	87	12			0.992554
530		87		12	0.992554
534	87	12			0.992554
535	87			12	0.992554
538		12	87		0.992554
541	87			12	0.992554
585	50			50	1.0
618		50		50	1.0
700	75			25	1.0
735		33		66	1.0
759	85		14		0.993533
763	85			14	0.993533
853	12			87	0.999964
1051			16	83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain