SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21823

Length: 815 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene21823

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome b5 isoform Cb5-B n=1 Tax=Vernicia fordii RepID=Q5V9L3_VERFO	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	cytochrome b5	-	-	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	82%
Blast2go	cell part	GO:0044464	Cellular Component	0.0	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome b5	IPR001199	-	0.0	82%
Blast2go	Cytochrome b5, heme-binding site	IPR018506	-	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
465		44		55	1.0
470		55	44		1.0
472		55	44		1.0
474		44		44	1.0
475		44		44	1.0
478			44	55	1.0
480		44	44	11	1.0
482			44	44	1.0
483		55		44	1.0
486		44		55	1.0
491	44		55		1.0
492	86	13			0.999973
493			13	86	0.999973
496			13	86	0.999973
499		13	86		0.999973
500	86	13			0.999973
503	86		13		0.999973
513		13	86		0.999973
515		13		86	0.999973
516	13	86			0.999973

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain