SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21680

Length: 766 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene21680

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	clathrin coat assembly protein ap17, putative; K11827 AP-2 complex subunit sigma-1	-	-	94%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	clathrin coat assembly protein	-	-	97%

Source	GOs	Term	Type	e value	Identity
Blast2go	transport	GO:0006810	Biological Process	0.0	97%

Source	InterPros	Term	Type	Identity
Blast2go	Longin-like	IPR011012	-	97%
Blast2go	Adaptor protein complex, sigma subunit	IPR016635	-	97%
Blast2go	AP complex, mu/sigma subunit	IPR022775	-	97%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
504	88	11			0.999937
507		11		88	0.999937
511	88		11		0.999937
512		11		88	0.999937
513	88			11	0.999937
514			11	88	0.999937
516		11	88		0.999937
517	11		88		0.999937
518	88	11			0.999937
520		11	88		0.999937
613	73		26		1.0
639	12	87			0.999964
640			12	87	0.999964
641		12		87	0.999964

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain