SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21650

Length: 1319 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene21650

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1S0_PHYPA	-	-	5.99994e-41	81%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	90%
Blast2go	skp1 family protein	-	-	7.70714e-44	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	SKP1 component	IPR001232	-	7.70714e-44	88%
Blast2go	BTB/POZ fold	IPR011333	-	7.70714e-44	88%
Blast2go	SKP1 component, POZ	IPR016073	-	7.70714e-44	88%

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
392			12	87	0.992554
393	87			12	0.992554
397			87	12	0.992554
400		12	87		0.992554
401		12		87	0.992554
404		87	12		0.992554
405	87		12		0.992554
407			87	12	0.992554
409	87			12	0.992554
410	87	12			0.992554
413	87	12			0.992554
453		11	88		0.923564
454			11	88	0.923564
461		11	88		0.923564
462	88	11			0.923564
463	88			11	0.923564
464	66	26		6	1.0
465			86	13	0.999973
467		20	13	66	1.0
470		89		10	1.0
472	89	3		7	0.998606
473	78	10	3	7	1.0
474			7	92	0.999532
475	85		7		0.996721
477	7	3		85	0.997433
478			7	92	0.999602
480		7	3	88	0.998862
482		13		86	1.0
484		10	86		1.0
485	10		89		1.0
756	92		7		0.999602
779	38		57		1.0
816	87			12	0.999964
924		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain