SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21268

Length: 940 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene21268

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cyclin-dependent kinases regulatory subunit, putative; K02219 cyclin-dependent kinase regulatory subunit CKS1	-	-	1.0e-32	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	cyclin-dependent kinases regulatory subunit	-	-	0.0	89%

Source	GOs	Term	Type	Identity
Blast2go	mitotic cell cycle	GO:0000278	Biological Process	89%
Blast2go	DNA endoreduplication	GO:0042023	Biological Process	89%
Blast2go	regulation of cell cycle	GO:0051726	Biological Process	89%
Blast2go	protein binding	GO:0005515	Molecular Function	89%
Blast2go	cytoplasm	GO:0005737	Cellular Component	89%
Blast2go	nucleus	GO:0005634	Cellular Component	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cyclin-dependent kinase, regulatory subunit	IPR000789	-	0.0	89%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
597			33	66	1.0
610	16			83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain