SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21134

Length: 572 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene21134
CGTCGTGACCTTGGCTGTCACTCAGCTTTTCCAGCAAGATCTTCATTTACAATTCCATAATTTTTTGAACATTAGTATTAGTAGTGGGTTGCTGGAGTTCTTGAGTCGTACTTTCCTTTTTATCCAATGTTTGATAGCATATTCATCCTAAACGTGTGCTCTAACATTATTCAATTTTCAGGTTGGTGAAGCCTGGCGGCATTTTAGTCTACAGTACTTGCTCAGTAGATCCAGGAGAAAACAACGAACGTGTTGAATCATTTCTTACTAGACATCCAGAATTCATTGTTGAAGCAGTGCAACAAATATGTTCCAAATGAGTTCATCTCTGAGGAGGGATTCTTCATTTCACATCCAACTAAGCATTTCCTTGATGGTGCTTTTGCAGCACGCTTGTTTCGTGTTTCTATTTAGATATAATCATATAACATTCTTTGAAGAATAAATAAAGTGATAAGTTTCAGGTCTGTGGGGTGCATACATAACTTTCTGGTCTATTGAAGCAAGCTTTTAATATCCTTTTAATTAATTGTCAATAATGGACTAATTTTTAACTTCAACATATGTGTAAT

Ace file of the UniGene sp_v1.1_unigene21134

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	sun protein; K03500 ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-]	-	-	2.0e-14	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	nol1 nop2 sun family protein	-	-	1.02219e-18	84%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	2.0e-14	68%

Source	KEGGs	Term	e value	Identity
AutoFact	Ubiquinone and other terpenoid-quinone biosynthesis	00130	2.0e-14	68%
AutoFact	Tetracycline biosynthesis	00253	2.0e-14	68%
AutoFact	Histidine metabolism	00340	2.0e-14	68%
AutoFact	Tyrosine metabolism	00350	2.0e-14	68%
AutoFact	Phenylalanine metabolism	00360	2.0e-14	68%
AutoFact	Tryptophan metabolism	00380	2.0e-14	68%
AutoFact	Benzoxazinoid biosynthesis	00402	2.0e-14	68%
AutoFact	Selenocompound metabolism	00450	2.0e-14	68%
AutoFact	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	2.0e-14	68%
AutoFact	Polycyclic aromatic hydrocarbon degradation	00624	2.0e-14	68%
AutoFact	Methane metabolism	00680	2.0e-14	68%
AutoFact	Porphyrin and chlorophyll metabolism	00860	2.0e-14	68%
AutoFact	Carotenoid biosynthesis	00906	2.0e-14	68%
AutoFact	Phenylpropanoid biosynthesis	00940	2.0e-14	68%
AutoFact	Flavonoid biosynthesis	00941	2.0e-14	68%
AutoFact	Anthocyanin biosynthesis	00942	2.0e-14	68%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	2.0e-14	68%
AutoFact	Isoquinoline alkaloid biosynthesis	00950	2.0e-14	68%
AutoFact	Insect hormone biosynthesis	00981	2.0e-14	68%
AutoFact	Biosynthesis of type II polyketide products	01057	2.0e-14	68%
AutoFact	Biosynthesis of alkaloids derived from shikimate pathway	01063	2.0e-14	68%
AutoFact	Metabolic pathways	01100	2.0e-14	68%
AutoFact	Biosynthesis of secondary metabolites	01110	2.0e-14	68%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LL05

Fln msg: Overlapping hits, possible frame ERROR between 305 and 262, Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 138 - 558

Fln protein: S*PWLSLSFSSKIFIYNSIIF*TLVLVVGCWSS*VVLSFLSNV**HIHPKRVL*HYSIFRLVKPGGILVYSTCSVDPGENNERVESxxxxxxxxxxxxxxxxYVPNEFISEEGFFISHPTKHFLDGAFAARLFRVSI*

Protein Length: 139

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGCTTTTCCAGCAAGATCTTCATTTACAATTCCATAATTTTTTGAACATTAGTATTAGTAGTGGGTTGCTGGAGTTCTTGAGTCGTACTTTCCTTTTTATCCAATGTTTGATAGCATATTCATCCTAAACGTGTGCTCTAACATTATTCAATTTTCAGGTTGGTGAAGCCTGGCGGCATTTTAGTCTACAGTACTTGCTCAGTAGATCCAGGAGAAAACAACGAACGTGTTGAATCAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTATGTTCCAAATGAGTTCATCTCTGAGGAGGGATTCTTCATTTCACATCCAACTAAGCATTTCCTTGATGGTGCTTTTGCAGCACGCTTGTTTCGTGTTTCTATTTAGATATAATCATATAACATTCTTTGAAGAATAAATAAAGTGATAAGTTTCAGGTCTGTGGGGTGCATACATAACTTTCTGGTCTATTGAAGCAAGCTTTTAATATCCTTTTAATTAATTGTCAATAATGGACTAATTTTTAACTTCAACATATGTGTAAT

Fln Alignment:

sp_v1.1_unigene21134___LVKPGGILVYSTCSVDPGENNERVESxxxxxxxxxxxxxxxYVPNEFISEEGFFISHPTKHFLDGAFAARLFRVSI
B8LL05_______________LVKPGGILVYSTCSVDPGENKERVESxxxxxxxxxxxxxxxYVPNEFISEEGFYTSHPTKHFLDGAFAARLFRVSI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain