SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20839

Length: 943 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene20839

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Abscisic acid 8'-hydroxylase 1 n=3 Tax=Arabidopsis RepID=ABAH1_ARATH	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Blast2go	cytochrome p450	-	-	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	(+)-abscisic acid 8'-hydroxylase.	EC:1.14.13.93	-	0.0	80%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Carotenoid biosynthesis	00906		0.0	80%

Source	GOs	Term	Type	Identity
Blast2go	abscisic acid metabolic process	GO:0009687	Biological Process	80%
Blast2go	response to water deprivation	GO:0009414	Biological Process	80%
Blast2go	release of seed from dormancy	GO:0048838	Biological Process	80%
Blast2go	defense response to fungus	GO:0050832	Biological Process	80%
Blast2go	response to red or far red light	GO:0009639	Biological Process	80%
Blast2go	binding	GO:0005488	Molecular Function	80%
Blast2go	(+)-abscisic acid 8'-hydroxylase activity	GO:0010295	Molecular Function	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	0.0	80%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC99

Fln msg: Separated hits, possible frame ERROR between 521 and 536, Distance to subject end: 97 aas, your sequence is longer than subject: 302 - 270

Fln protein: MMASPEAAKFVLTSHAHLFKPTFPASKERLLGPQALFFHQGDYHARLRKLVLNSFLPGKIRSIVAHIESIALHALDSWEDSTVNTFQEMKRYAFEVGLFSIFGNQCHEILEKEELKQSYYTLERGYNSMPLNLPGTPFQQAMKARKRLSEILSKLIAERRxxxxxxKEGLLETLISSEDESCGQPLTDDQIADNIIGVIFAAQDTTASVLTWILKYLRDHAELLEAVTAEQEAIHEAKGDGCLTWADTKKMPLTSRVIQETLRIATILSFTFREAIQDVEYKGYLIPKGWKVMPLFRNIHHS

Protein Length: 303

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGATGCCCTTGCATT_-_ATGATGGCTAGCCCAGAAGCGGCTAAATTCGTTTTGACAAGCCATGCTCACCTGTTCAAGCCCACATTTCCAGCGAGTAAAGAAAGGCTGTTAGGCCCACAGGCCCTTTTCTTTCACCAGGGTGATTACCACGCACGCCTCAGGAAGCTGGTACTCAATTCCTTTCTTCCTGGCAAGATTCGTTCAATTGTTGCACACATTGAATCTATTGCCCTCCACGCCCTGGATTCCTGGGAGGACTCCACAGTCAACACGTTTCAAGAAATGAAAAGATATGCTTTTGAGGTGGGGCTGTTTTCGATCTTCGGTAACCAGTGCCATGAAATTTTGGAGAAAGAGGAGCTTAAGCAGTCTTACTACACGCTGGAAAGGGGATACAACTCCATGCCACTCAACCTCCCAGGGACACCATTTCAGCAAGCCATGAAGGCTAGGAAAAGACTAAGCGAGATATTGAGCAAACTAATTGCAGAAAGAAGATCxxxxxxxxxxxxxxxGAAAGAGGGTTTGCTGGAGACATTGATATCGTCAGAAGACGAAAGCTGTGGCCAGCCCCTCACAGACGATCAGATTGCAGATAATATCATTGGAGTTATTTTCGCAGCTCAGGATACAACGGCCAGTGTCTTGACATGGATCCTCAAATACCTCAGAGATCATGCCGAACTTCTCGAAGCCGTGACGGCTGAGCAGGAGGCTATTCATGAGGCCAAAGGTGATGGCTGCTTGACATGGGCTGACACCAAGAAAATGCCACTAACTTCCAGGGTAATTCAAGAAACTTTGAGAATCGCCACGATTTTGTCATTCACTTTCAGAGAAGCTATTCAGGATGTGGAATACAAAGGCTATCTTATTCCAAAGGGATGGAAGGTTATGCCTCTGTTTCGAAACATTCACCACAGT

Fln Alignment:

sp_v1.1_unigene20839___MPLNLPGTPFQQAMKARKRLSEILSKLIAERRSxxxxxKEGLLETLISSEDESCGQPLTDDQIADNIIGVIFAAQDTTASVLTWILKYLRDHAELLEAVTAEQEAIHEAKGDGCLTWADTKKMPLTSRVIQETLRIATILSFTFREAIQDVEYKGYLIPKGWKVMPLFRNIHHS
D5AC99_______________MPLNLPGTPFHKAMKARKRLSKILSKIIAQRRSxxxxxKEGLLETLMSSEEESCGQPLTYDQIADNIIGVIFAAQDTTASVLTWILKYLRDHAELLEAVTAEQEAIHEAKGEGYLTWADTKKMPLTSRVIQETLRIATILSFTFREAVQDVEYKGYLIPKGWKVMPLFRNIHHS

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
763			16	83	0.994512
764			83	16	0.994512
766			16	83	0.994512
771	83	16			0.994512
773			83	16	0.994512
779	83			16	0.994512
873		50		50	1.0
879	50			50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain