SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20379

Length: 336 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene20379
CGTCGTGACCTTGGCTGTCACTCATTTTCAGAGTCGGCCCTTGATGTACTCAACAAATTGAGCGAGCGACAGCAGAAACAACCCTCTAAAAAGAAAGCCAATCGGCTTTATTAGAAAGAATTGGCTTTAGCTTTTCTTATTTTAACCTCTGCGAGGAGTTTATTGTCTGCTCAAGGAATTCATTTTTACTTTTTACTGTTTGAAGGGATTTCTTTCCTCCTTGTTGCCCTTGATTTGATTGGGGAGCAGGTTAGTTGAATTCCGCAGCATGAAGCTTGGGCAACCTCTTTACAAGTTGCCTTTCCTTTAATGTTCTTTGACACTAACTGGAGACCT

Ace file of the UniGene sp_v1.1_unigene20379

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	transferase, transferring glycosyl groups, putative (EC:2.4.1.12)	-	-	9.0e-20	71%
FL-Next	sp=Probable xyloglucan glycosyltransferase 7; Oryza sativa subsp. japonica (Rice).	-	-	0.0	69%
Blast2go	protein	-	-	1.69925e-21	82%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q6L538

Fln msg: your sequence is shorter than subject: 86 - 688

Fln protein: RRDLGCHSFSESALDVLNKLSERQQKQPSKKKANRLY*KELALAFLILTSARSLLSAQGIHFYFLLFEGISFLLVALDLIGEQVS*

Protein Length: 87

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTCAGAGTCGGCCCTTGATGTACTCAACAAATTGAGCGAGCGACAGCAGAAACAACCCTCTAAAAAGAAAGCCAATCGGCTTTATTAGAAAGAATTGGCTTTAGCTTTTCTTATTTTAACCTCTGCGAGGAGTTTATTGTCTGCTCAAGGAATTCATTTTTACTTTTTACTGTTTGAAGGGATTTCTTTCCTCCTTGTTGCCCTTGATTTGATTGGGGAGCAGGTTAGTTGA___ATTCCGCAGCATGAAGCTTGGGCAACCTCTTTACAAGTTGCCTTTCCTTTAATGTTCTTTGACACTAACTGGAGACCT

Fln Alignment:

sp_v1.1_unigene20379___LDVLNKLSERQQKQPSKKKANRLY*KELALAFLILTSA-RSLLSAQGIHFYFLLFEGISFLLVALDLIGEQV
Q6L538_______________LDALTKEESNPKKDSKKKKHNRIYRKELALSFLLLTAAARSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain