SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20377

Length: 953 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene20377

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gibberellin-regulated protein 2 n=1 Tax=Arabidopsis thaliana RepID=GASA2_ARATH	-	-	1.0e-25	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Blast2go	gibberellin-regulated protein 2 precursor	-	-	1.51761e-42	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Gibberellin regulated protein	IPR003854	-	1.51761e-42	73%

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
79		66	33		0.997452
80		66	33		0.997452
98	25	75			0.996473
100			25	75	0.996473
101	75		25		0.996473
102			25	75	0.996473
103			25	75	0.996473
254	25		75		0.996473
810	11		88		0.923564
882	83		16		0.999991
941	85	14			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain