SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20339

Length: 254 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene20339
CGTCGTGACCTTGGCTGTCACTCAATTTTAGAAAAAGTAAACATTTTACATTATTTCGATGCGATTGTGGATGGAAACGATGTTTCGAATGCAAAACCAGACCCTGAAGTATTTTTGGTTGGAGCACAAAAAGTTGATCAACCGAATGATAACGCCATTGTCTTCGAAGATTCTGTGGCAGGCATTGAAGCTGCTAATATTGCAGAAATGACGAGTGTCGGAATTGGCGAAAAAAACGTATTGAATGAAGCTGA

Ace file of the UniGene sp_v1.1_unigene20339

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative beta-phosphoglucomutase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J0D3_9FLAO	-	-	5.0e-28	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	32%
Blast2go	beta-phosphoglucomutase	-	-	9.58425e-28	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Haloacid dehalogenase-like hydrolase	IPR005834	-	9.58425e-28	77%
Blast2go	HAD-superfamily hydrolase, subfamily IA, variant 3	IPR006402	-	9.58425e-28	77%
Blast2go	HAD-like domain	IPR023214	-	9.58425e-28	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLI7

Fln msg: Distance to subject end: 57 aas, your sequence is shorter than subject: 84 - 416

Fln protein: RRDLGCHSILEKVNILHYFDAIVDGNDVSNAKPDPEVFLVGAQKVDQPNDNAIVFEDSVAGIEAANIAEMTSVGIGEKNVLNEA

Protein Length: 85

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTAGAAAAAGTAAACATTTTACATTATTTCGATGCGATTGTGGATGGAAACGATGTTTCGAATGCAAAACCAGACCCTGAAGTATTTTTGGTTGGAGCACAAAAAGTTGATCAACCGAATGATAACGCCATTGTCTTCGAAGATTCTGTGGCAGGCATTGAAGCTGCTAATATTGCAGAAATGACGAGTGTCGGAATTGGCGAAAAAAACGTATTGAATGAAGCTGA

Fln Alignment:

sp_v1.1_unigene20339___LEKVNILHYFDAIVDGNDVSNAKPDPEVFLVGAQKVDQPNDNAIVFEDSVAGIEAANIAEMTSVGIGEKNVLNE
B8LLI7_______________IEAVGMQGFFDVVVAAEDVYRGKPDPEMVMYAAQLLNIISERCILFGNSNSSVEASHDICMKCVGVAGKHPVFE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain