SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20316

Length: 769 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene20316

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	big map kinase/bmk, putative (EC:2.7.11.24); K04371 extracellular signal-regulated kinase 1/2 [EC:2.7.11.24]	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	map kinase	-	-	87%

Source	ECs	Term	Type	e value	Identity
AutoFact	Mitogen-activated protein kinase.	EC:2.7.11.24	-	0.0	65%

Source	GOs	Term	Type	Identity
Blast2go	response to hydrogen peroxide	GO:0042542	Biological Process	87%
Blast2go	kinase activity	GO:0016301	Molecular Function	87%
Blast2go	protein binding	GO:0005515	Molecular Function	87%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	87%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	87%
Blast2go	Protein kinase-like domain	IPR011009	-	87%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	87%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	87%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
86			25	75	0.996473

SSRs (tot: 1)

Start position	End position	Sequence	Length
109	122	CTG CTG CTG CTG CT	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain