SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20237

Length: 640 nt

Origin of reads: Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene20237

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ALG3; ALG3; alpha-1,3-mannosyltransferase/ catalytic; K03845 alpha-1,3-mannosyltransferase [EC:2.4.1.130]	-	-	2.0e-24	80%
FL-Next	Isoform 3 of Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Arabidopsis thaliana GN=ALG3	-	-	0.0	80%
Blast2go	alg3 alpha- -mannosyltransferase catalytic	-	-	8.62667e-25	85%

Source	ECs	Term	Type	e value	Identity
AutoFact		EC:2.4.1.13-	-	2.0e-24	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein glycosylation	GO:0006486	Biological Process	8.62667e-25	85%
Blast2go	alpha-1,3-mannosyltransferase activity	GO:0000033	Molecular Function	8.62667e-25	85%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	8.62667e-25	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycosyltransferase, ALG3	IPR007873	-	8.62667e-25	85%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
12			66	33	0.997452
15		33	66		0.997452
16	33			66	0.997452
20	33	66			0.997452
26		33		66	0.997452
30	66	33			0.997452
34	66			33	0.997452
35			85	14	0.993533
74		87	12		0.992554
84		87	12		0.992554
85		12		87	0.992554
87	12	87			0.992554
88	87			12	0.992554
89	87	12			0.992554
91	87	12			0.992554
93	87	12			0.992554
94	12			87	0.992554
131		87		12	0.992554
357	10			90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain