SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene19528

Length: 309 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene19528
CGTCGTGACCTTGGCTGTCACTCTTGGAAACAACCAAACATTTAAGGGTCAGTCATTCTATACCAAACAGCATGGTGTGAAGCTCCATAGGCTTGTGTATGCAGAAGACATTGCCTCTACTGATGCAGCTGCCTCTAGAGCAAGGACTTGCGAGGCAGGATCTCTGAATGCCACTTTAGCAAAGGGAAAGTTTGTTCTATGTTTCCAAACTAGAACTCAAAGGCTAAGCAGTGATGCAGCTCTGAGTGTCTACAGTGCCAAAGGGATTGGAGTGGTCTACGCACAGGTTCCTACCAAGACAATAATTTC

Ace file of the UniGene sp_v1.1_unigene19528

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9RHC5_RICCO	-	-	4.0e-18	44%
FL-Next	tr=Xylem serine proteinase 1, putative; Ricinus communis (Castor bean).	-	-	0.0	52%
Blast2go	xylem serine proteinase 1	-	-	6.65349e-18	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	serine-type peptidase activity	GO:0008236	Molecular Function	6.65349e-18	69%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	6.65349e-18	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RHC5

Fln msg: Distance to subject end: 326 aas, your sequence is shorter than subject: 102 - 774

Fln protein: VVTLAVTLGNNQTFKGQSFYTKQHGVKLHRLVYAEDIASTDAAASRARTCEAGSLNATLAKGKFVLCFQTRTQRLSSDAALSVYSAKGIGVVYAQVPTKTII

Protein Length: 103

Fln nts: CGTCGTGACCTTGGCTGTCACTCTTGGAAACAACCAAACATTTAAGGGTCAGTCATTCTATACCAAACAGCATGGTGTGAAGCTCCATAGGCTTGTGTATGCAGAAGACATTGCCTCTACTGATGCAGCTGCCTCTAGAGCAAGGACTTGCGAGGCAGGATCTCTGAATGCCACTTTAGCAAAGGGAAAGTTTGTTCTATGTTTCCAAACTAGAACTCAAAGGCTAAGCAGTGATGCAGCTCTGAGTGTCTACAGTGCCAAAGGGATTGGAGTGGTCTACGCACAGGTTCCTACCAAGACAATAATTTC

Fln Alignment:

sp_v1.1_unigene19528___VTLGNNQTFKGQSFYTKQHGVKLHRLVYAEXXXXXXXXXXXXXXCEAGSLNATLAKGKFVLCFQTRTQRLSSDAALSVYSAKGIGVVYAQVPTKTI
B9RHC5_______________ITLGNNQTLRGQAFYTGKNTGEFHPIVNGEDIAANDADEYGARGCEPGTLNATLARGKVILCFQSRSQRSSTSAVTTVLDVQGVGLIFAQYPTKDV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain