SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene19396

Length: 1297 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene19396

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE	-	-	6.0e-38	100%
FL-Next	sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	100%
Blast2go	histone h4	-	-	1.05565e-37	100%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	1.05565e-37	100%
Blast2go	nucleosome assembly	GO:0006334	Biological Process	1.05565e-37	100%
Blast2go	cytoskeleton organization	GO:0007010	Biological Process	1.05565e-37	100%
Blast2go	DNA binding	GO:0003677	Molecular Function	1.05565e-37	100%
Blast2go	actin binding	GO:0003779	Molecular Function	1.05565e-37	100%
Blast2go	nucleolus	GO:0005730	Cellular Component	1.05565e-37	100%
Blast2go	vacuole	GO:0005773	Cellular Component	1.05565e-37	100%
Blast2go	nucleosome	GO:0000786	Cellular Component	1.05565e-37	100%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.05565e-37	100%
Blast2go	chloroplast	GO:0009507	Cellular Component	1.05565e-37	100%
Blast2go	thylakoid	GO:0009579	Cellular Component	1.05565e-37	100%
Blast2go	actin cytoskeleton	GO:0015629	Cellular Component	1.05565e-37	100%
Blast2go	mitochondrion	GO:0005739	Cellular Component	1.05565e-37	100%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histone H4	IPR001951	-	1.05565e-37	100%
Blast2go	Histone core	IPR007125	-	1.05565e-37	100%
Blast2go	Histone-fold	IPR009072	-	1.05565e-37	100%
Blast2go	Histone H4, conserved site	IPR019809	-	1.05565e-37	100%

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
53	83			16	0.994512
136	11		88		0.923564
138	88	11			0.923564
250		66		33	0.997452
315			93	6	0.999453
316			6	93	0.999453
322	93			6	0.999453
323		6	93		0.999364
641		14		85	0.999981
687	27		72		1.0
883		18		81	0.999994

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain