SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene19245

Length: 797 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene19245

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	late embryogenesis abundant protein-related / LEA protein-related [Arabidopsis thaliana] dbj\|BAB10109.1\| root cap protein 2-like protein [Arabidopsis thaliana] gb\|AAZ23915.1\| At5g54370 [Arabidopsis thaliana]	-	-	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	44%
Blast2go	late embryogenesis abundant lea	-	-	67%

Full-Lengther Next Prediction

SNPs (tot: 40)

Position	A %	C %	G %	T %	Probability
205	66		33		0.997452
206			66	33	0.997452
208	66		33		0.997452
210			33	66	0.997452
212	66	33			0.997452
213		33		66	0.997452
214			66	33	0.997452
216			33	66	0.997452
218	66	33			0.997452
219	66			33	0.997452
220	66		33		0.997452
224		66		33	0.997452
231		25	75		0.996473
232	75		25		0.996473
235	25	75			0.996473
236	75	25			0.996473
237		25	75		0.996473
244	75		25		0.996473
249			75	25	0.996473
252			75	25	0.996473
259	14		14		0.984337
260		85		14	0.993533
262	85		14		0.993533
264			14	85	0.993533
267		14		85	0.993533
268			85	14	0.993533
269	85			14	0.993533
272	85	14			0.993533
273			85	14	0.993533
277	85	14			0.993533
296			88	11	0.923564
297	88	11			0.923564
298	88		11		0.923564
304			11	88	0.923564
306			88	11	0.923564
308	88			11	0.923564
310	11		88		0.923564
311	88	11			0.923564
313	11			88	0.923564
545		11		88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain