SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18990

Length: 711 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18990

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	tRNA-dihydrouridine synthase, putative; K05542 tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]	-	-	4.99997e-41	51%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	58%
Blast2go	protein	-	-	2.10195e-44	77%

Source	ECs	Term	Type	e value	Identity
AutoFact		EC:1.-.-.-	-	4.99997e-41	51%

Source	GOs	Term	Type	e value	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	2.10195e-44	77%
Blast2go	tRNA processing	GO:0008033	Biological Process	2.10195e-44	77%
Blast2go	flavin adenine dinucleotide binding	GO:0050660	Molecular Function	2.10195e-44	77%
Blast2go	tRNA dihydrouridine synthase activity	GO:0017150	Molecular Function	2.10195e-44	77%
Blast2go	mitochondrion	GO:0005739	Cellular Component	2.10195e-44	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	tRNA-dihydrouridine synthase	IPR001269	-	2.10195e-44	77%
Blast2go	Aldolase-type TIM barrel	IPR013785	-	2.10195e-44	77%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
380	83		16		0.999991

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain