SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18960

Length: 674 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18960

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Enoyl-CoA hydratase, mitochondrial precursor, putative (EC:4.2.1.17); K05605 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	-	-	6.0e-07	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	unknown [Picea sitchensis]	-	-	6.68643e-18	84%

Source	ECs	Term	Type	e value	Identity
AutoFact	3-hydroxyisobutyryl-CoA hydrolase.	EC:3.1.2.4	-	6.0e-07	45%

Source	KEGGs	Term	e value	Identity
AutoFact	Valine, leucine and isoleucine degradation	00280	6.0e-07	45%
AutoFact	beta-Alanine metabolism	00410	6.0e-07	45%
AutoFact	Propanoate metabolism	00640	6.0e-07	45%
AutoFact	Metabolic pathways	01100	6.0e-07	45%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	6.68643e-18	84%
Blast2go	catalytic activity	GO:0003824	Molecular Function	6.68643e-18	84%

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
248		90	10		0.90298
252	90	10			0.90298
253	90	10			0.90298
254	90			10	0.90298
255		90		10	0.90298
257		90	10		0.90298
259	90			10	0.90298
262		10	90		0.90298
263	10		90		0.90298
264		10	90		0.90298
269			90	10	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain