SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18866

Length: 1702 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18866

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	vacuolar proton atpase, putative (EC:3.6.3.14); K02154 V-type H+-transporting ATPase subunit I [EC:3.6.3.14]	-	-	74%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	75%
Blast2go	vacuolar proton	-	-	85%

Source	ECs	Term	Type	e value	Identity
AutoFact	H(+)-transporting two-sector ATPase.	EC:3.6.3.14	-	0.0	74%

Source	KEGGs	Term	Identity
AutoFact	Oxidative phosphorylation	00190	74%
AutoFact	Photosynthesis	00195	74%
AutoFact	Methane metabolism	00680	74%
AutoFact	Metabolic pathways	01100	74%

Source	GOs	Term	Type	Identity
Blast2go	cellular response to salt stress	GO:0071472	Biological Process	85%
Blast2go	cellular response to nutrient levels	GO:0031669	Biological Process	85%
Blast2go	ATP synthesis coupled proton transport	GO:0015986	Biological Process	85%
Blast2go	hydrogen ion transmembrane transporter activity	GO:0015078	Molecular Function	85%
Blast2go	ATPase activity	GO:0016887	Molecular Function	85%
Blast2go	hydrogen-translocating pyrophosphatase activity	GO:0009678	Molecular Function	85%
Blast2go	proton-transporting two-sector ATPase complex, proton-transporting domain	GO:0033177	Cellular Component	85%
Blast2go	mitochondrion	GO:0005739	Cellular Component	85%
Blast2go	plant-type vacuole membrane	GO:0009705	Cellular Component	85%
Blast2go	chloroplast	GO:0009507	Cellular Component	85%
Blast2go	plasma membrane	GO:0005886	Cellular Component	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	ATPase, V0/A0 complex, 116kDa subunit	IPR002490	-	0.0	85%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: D7U5K0

Fln msg: Distance to subject end: 321 aas, your sequence is shorter than subject: 498 - 822

Fln protein: MARNGSCCPPMDLLRSEEMNLVQLIIPVESAHDSITYLGQLGLLQFKDLNADKSPFQRTYANQVKRCGEMSRKLRFFREQMIKAGLSPSTRSALRPDIELDDLEIKLGELEAELVEINANNEKLQRSHSELQEFKLVLQKAGSFFSLARSDASAHQREIEETSYVGEGSMDSPLLLEQEMLTEPSKQARLGFISGLVPKVKAIPFERILFRATRGNMFLKQSAVEQPVTDPVSGEKVEKIVFVIFYSGERARTKVMKICEAFGANRYPFPEEISKQRQMIGEVSGRLAELQSTIDAGIRHRDNVLTTIGYQFEQWNLLVRTEKAVYNTLNMLSIDVTRKCLVAEGWCPVFAKSQVQDALHRATVDSNSQVGTIFQVLYTKEAPPTYFRTNKFTTAFQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGICLLLASLWLICRERKLGSQKLGDIMEMAFGGRYVIFMMAIFSIYCGLIYNEFFSVPFHIFGP

Protein Length: 499

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGGTATCGGCTCTACGCCAGATTGTGGTACAGAGCGGATGAGGGTTTGGGAAAAGGAAATACCCTCAACGGAAGAGAATAATAGATCCGATCTTCCTTACGGTTCCTCGGTAGAAAATTGCAGCTGGTAATGAGTGGGCTTTTTAAGTTTTAGGATCCGTGAGCGTAGACCTTTGGCATAGCC_-_ATGGCAAGAAACGGGAGCTGTTGCCCTCCTATGGATCTCCTCCGTTCGGAGGAGATGAATTTAGTTCAGCTTATCATTCCTGTTGAGTCTGCGCATGATAGCATCACGTACCTCGGACAGCTCGGCCTTCTTCAATTCAAGGATCTTAATGCAGACAAGAGCCCATTTCAACGGACATATGCTAATCAGGTGAAACGATGTGGAGAAATGTCACGGAAGTTGCGCTTTTTTAGAGAACAAATGATTAAAGCTGGGTTATCACCTTCTACAAGGTCTGCTTTACGTCCAGATATTGAGTTGGATGACCTTGAGATAAAGCTTGGTGAACTTGAAGCAGAACTTGTAGAGATTAATGCAAATAATGAAAAGTTGCAGCGTTCTCACAGCGAGCTTCAGGAATTTAAGCTTGTACTCCAAAAAGCTGGTTCATTCTTCTCATTAGCTCGAAGTGATGCGTCTGCTCATCAGAGAGAAATAGAAGAAACCTCGTATGTTGGGGAAGGATCTATGGATAGCCCGTTGTTATTAGAGCAGGAAATGTTGACAGAACCTTCAAAGCAAGCAAGGCTGGGGTTTATTAGTGGTCTTGTTCCCAAAGTAAAGGCAATACCTTTTGAAAGGATTCTTTTTCGTGCTACAAGGGGTAACATGTTCTTAAAGCAGTCTGCAGTTGAGCAACCTGTCACTGATCCTGTCTCAGGTGAAAAGGTTGAAAAAATTGTTTTTGTTATTTTTTATTCTGGAGAGCGAGCAAGGACTAAAGTAATGAAGATTTGTGAAGCCTTTGGGGCAAATCGCTATCCCTTCCCTGAAGAAATCAGTAAACAAAGGCAAATGATAGGAGAGGTTTCTGGAAGGCTCGCAGAGCTGCAAAGCACAATAGATGCTGGCATTCGCCATCGGGATAATGTGTTGACAACAATTGGATATCAGTTTGAACAGTGGAATCTTTTGGTAAGAACAGAGAAAGCTGTTTACAACACTCTGAACATGCTAAGCATTGATGTTACAAGGAAGTGTCTAGTTGCTGAGGGGTGGTGCCCTGTATTTGCAAAAAGTCAGGTTCAAGATGCATTGCATCGTGCAACTGTGGATAGTAACTCACAGGTTGGAACTATATTCCAAGTGCTTTATACAAAGGAGGCACCACCCACATATTTCAGAACAAATAAATTTACCACTGCTTTCCAAGAAATAGTTGATGCATATGGTGTGGCTAAGTACCAAGAGGCAAATCCTGGTGTATTCACCATCGTTACATTTCCATTTTTGTTTGCTGTAATGTTTGGTGACTGGGGCCATGGTATATGTTTATTACTTGCATCCTTGTGGCTCATATGCAGAGAAAGAAAACTTGGTAGTCAGAAACTTGGAGACATAATGGAGATGGCTTTTGGAGGTCGCTATGTGATTTTTATGATGGCAATCTTCTCAATTTACTGTGGACTCATCTACAATGAATTCTTTTCAGTTCCCTTTCACATTTTTGGCCCAT

Fln Alignment:

sp_v1.1_unigene18866___GSCCPPMDLLRSEEMNLVQLIIPVESAHDSITYLGQLGLLQFKDLNADKSPFQRTYANQVKRCGEMSRKLRFFREQMIKAGLSPSTRSALRPDIELDDLEIKLGELEAELVEINANNEKLQRSHSELQEFKLVLQKAGSFFSLARSDASAHQREIEETSYVGEGSMDSPLLLEQEMLTEPSKQARLGFISGLVPKVKAIPFERILFRATRGNMFLKQSAVEQPVTDPVSGEKVEKIVFVIFYSGERARTKVMKICEAFGANRYPFPEEISKQRQMIGEVSGRLAELQSTIDAGIRHRDNVLTTIGYQFEQWNLLVRTEKAVYNTLNMLSIDVTRKCLVAEGWCPVFAKSQVQDALHRATVDSNSQVGTIFQVLYTKEAPPTYFRTNKFTTAFQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGICLLLASLWLICRERKLGSQKLGDIMEMAFGGRYVIFMMAIFSIYCGLIYNEFFSVPFHIFGP
D7U5K0_______________GGCCPPMDLFRSEPMQLVQLIIPIESAHHTISYLGDLGLIQFKDLNVEKSPFQRTYAAQIKKCAEMARKLRFFKEQMSKAGLSPSAKIMMRGDIDMDDLEVKLGELEAELVEINANGEKLQRAYSELAEYKLVLHKAGEFFYSIRSSATAQQREIEAHS-ISEESVDTPLLLEQEMSTDLSKQVKLGFLAGLVPRVKSMAFERILFRATRGNVFLRQSAVEDPVTDPVSGEKIEKNVFVVFYSGEKVKNKILKICEAFGANRYSFPEDLGKQAQMITEVSGRLSELKTTIDVGLLHRGNLLQTIGDQFEQWNLLVRKEKSIYHTLNMLSIDVTKKCLVAEGWSPTFATKQIQDALQRATFDSNSQVGAIFQVLHTIESPPTYFRTNKFTSAFQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGLCLLLATLFFIIREKKLSNQKLGDITEMTFGGRYVILMMALFSIYTGLIYNEFFSVPFELFGP

SNPs (tot: 11)

Position	A %	C %	T %	Probability
313		36	63	1.0
319		90	9	0.999842
694		75	25	0.996473
724		66	33	0.997452
740	33	66		1.0
880	33		66	0.997452
973	33	66		1.0
1069		40	60	1.0
1471		8	92	0.999718
1483		8	91	0.999807
1519		13	86	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain