SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18860

Length: 1091 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18860

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	USP-like protein n=1 Tax=Astragalus sinicus RepID=Q07A28_ASTSI	-	-	9.99995e-41	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	46%
Blast2go	er6 protein	-	-	2.46208e-42	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Universal stress protein A	IPR006015	-	2.46208e-42	71%
Blast2go	UspA	IPR006016	-	2.46208e-42	71%
Blast2go	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	2.46208e-42	71%

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
120	25			50	0.995533
121	25	25	25	25	0.997389
122			75	25	0.996473
123		25	75		0.996473
124	25		50	25	0.995533
177		33	66		1.0
181	33			66	1.0
183		33	66		1.0
184	66			33	1.0
186			33	66	1.0
187	66		33		1.0
192		33	66		1.0
193	33		66		1.0
278		88		11	0.923564
299		11		88	0.923564
599	66		33		0.99834
726			90	10	0.991528
727		10	90		0.991528
729	80		10	10	0.967733
730		13	86		0.999981
861			21	78	1.0
875	53	46			1.0
925	45		54		1.0
976		10		90	0.90298
1043	66		16		0.988813

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain