SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18834

Length: 616 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18834

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PCS1; PCS1 (PROMOTION OF CELL SURVIVAL 1); aspartic-type endopeptidase/ peptidase	-	-	2.0e-18	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Blast2go	aspartyl protease family protein	-	-	1.17872e-20	60%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glutathione gamma-glutamylcysteinyltransferase.	EC:2.3.2.15	-	1.17872e-20	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	programmed cell death	GO:0012501	Biological Process	1.17872e-20	60%
Blast2go	defense response by callose deposition in cell wall	GO:0052544	Biological Process	1.17872e-20	60%
Blast2go	defense response to bacterium	GO:0042742	Biological Process	1.17872e-20	60%
Blast2go	phytochelatin biosynthetic process	GO:0046938	Biological Process	1.17872e-20	60%
Blast2go	response to arsenic-containing substance	GO:0046685	Biological Process	1.17872e-20	60%
Blast2go	indole glucosinolate catabolic process	GO:0042344	Biological Process	1.17872e-20	60%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	1.17872e-20	60%
Blast2go	peptidase activity	GO:0008233	Molecular Function	1.17872e-20	60%
Blast2go	copper ion binding	GO:0005507	Molecular Function	1.17872e-20	60%
Blast2go	glutathione gamma-glutamylcysteinyltransferase activity	GO:0016756	Molecular Function	1.17872e-20	60%
Blast2go	cadmium ion binding	GO:0046870	Molecular Function	1.17872e-20	60%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	1.17872e-20	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Peptidase A1	IPR001461	-	1.17872e-20	60%
Blast2go	Peptidase aspartic, catalytic	IPR009007	-	1.17872e-20	60%
Blast2go	Peptidase aspartic	IPR021109	-	1.17872e-20	60%

Full-Lengther Next Prediction

SNPs (tot: 38)

Position	A %	C %	G %	T %	Probability
70	90		9		1.0
72		9	90		1.0
78	90	9			1.0
79	90			9	1.0
82			9	90	1.0
84	90			9	1.0
89		6	90		0.997073
90	6	3	90		0.997073
175	92		7		1.0
176		92		7	1.0
178		92	7		1.0
179	92			7	1.0
180			7	92	1.0
181	7	92			1.0
183	92	7			1.0
187	92		7		1.0
188	92	7			1.0
192		7	92		1.0
194		7	92		1.0
512		90	10		0.90298
513		90		10	0.90298
515		90	10		0.90298
517	10	90			0.90298
519	90	10			0.90298
522		90	10		0.90298
524	90	10			0.90298
526		90	10		0.90298
527		90		10	0.90298
560			90	10	0.90298
562	88	11			0.923564
564		88	11		0.923564
567		88	11		0.923564
568	11	88			0.923564
569		88	11		0.923564
572	11			88	0.923564
574	11			88	0.923564
576		88	11		0.923564
577	88	11			0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain