SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18663

Length: 987 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18663

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	LEA_2 domain containing protein	-	-	1.0e-09	19%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	protein	-	-	0.0	67%

Source	InterPros	Term	Type	Identity
Blast2go	Late embryogenesis abundant protein, LEA-14	IPR004864	-	67%
Blast2go	Immunoglobulin-like fold	IPR013783	-	67%
Blast2go	Water stress and hypersensitive response domain	IPR013990	-	67%

Full-Lengther Next Prediction

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
318		6	87	3	0.992016
321		93		6	0.999153
322	87		3	6	0.992016
323	87			12	1.0
326	87		6	3	0.992016
359		93	6		0.999264
364	93			6	0.999264
368	93	6			0.999264
370		6		93	0.99903
372			93	6	0.99903
373	87	9			1.0
376			6	93	0.99903
377	6	3	90		0.996531
383	3	90		6	0.996531
384	93		6		0.99903
385	93			6	0.99903
386		6	93		0.999153
388		6		93	0.999153
389		3	90	6	0.996531
390		6	93		0.99903
401			90	3	0.997544
422			8	92	0.999718
617			90	10	0.90298
618		10	90		0.90298
637			83	16	0.994512
866		40		60	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain