SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18547

Length: 607 nt

Origin of reads: Biogeco_1

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18547

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	70%
Blast2go	protein	-	-	3.74968e-24	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	RNA processing	GO:0006396	Biological Process	3.74968e-24	79%
Blast2go	RNA binding	GO:0003723	Molecular Function	3.74968e-24	79%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	3.74968e-24	79%
Blast2go	mitochondrion	GO:0005739	Cellular Component	3.74968e-24	79%

Full-Lengther Next Prediction

SNPs (tot: 38)

Position	A %	C %	G %	T %	Probability
60			80	20	0.999996
61	80		20		0.999996
63			18	81	0.999994
64		72	27		1.0
67	81		18		0.999994
88	36		63		1.0
123	36			63	1.0
154	18			81	0.999994
157	45	54			1.0
193		40		60	1.0
301	83			16	0.999991
304	83			16	0.999991
305	83			16	0.999991
306		16		83	0.999991
307			16	83	0.999991
310	18			81	0.999994
311			10	90	0.90298
312	10			90	0.90298
313	10			90	0.90298
314		90	10		0.90298
316		10	90		0.90298
318		10		90	0.90298
319		10	90		0.90298
322		90		10	0.90298
323			90	10	0.90298
324		90		10	0.90298
325	90			10	0.90298
326	90			10	0.90298
327	10		90		0.90298
330		10	90		0.90298
333	10			90	0.90298
354	75		25		0.996473
355	25		75		0.996473
356	75		25		0.996473
358	25		75		0.996473
360	75		25		0.996473
361	25		75		0.996473
362	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain