SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18457

Length: 802 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18457

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Map3k delta-1 protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RZR2_RICCO	-	-	1.96182e-44	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Blast2go	kinase family protein	-	-	2.8026e-45	87%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.7.112.1	-	2.8026e-45	87%
Blast2go	Mitogen-activated protein kinase kinase kinase.	EC:2.7.11.25	-	2.8026e-45	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	2.8026e-45	87%
Blast2go	signal transduction	GO:0007165	Biological Process	2.8026e-45	87%
Blast2go	protein phosphorylation	GO:0006468	Biological Process	2.8026e-45	87%
Blast2go	protein serine/threonine/tyrosine kinase activity	GO:0004712	Molecular Function	2.8026e-45	87%
Blast2go	ATP binding	GO:0005524	Molecular Function	2.8026e-45	87%
Blast2go	MAP kinase kinase kinase activity	GO:0004709	Molecular Function	2.8026e-45	87%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	2.8026e-45	87%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	2.8026e-45	87%
Blast2go	Protein kinase-like domain	IPR011009	-	2.8026e-45	87%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
559	75	25			0.996473
560	75		25		0.996473
563	75		25		0.996473
566			25	75	0.996473
568		25	75		0.996473
571		75		25	0.996473
572	75		25		0.996473
573			25	75	0.996473
576		75	25		0.996473
577		75		25	0.996473
580	25		75		0.996473
581		25	75		0.996473
582	75			25	0.996473
583	75	25			0.996473
630	33			66	0.997452
722			25	75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain