SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18357

Length: 991 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene18357 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA methyltransferase 1-associated protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTZ2_PHYPA	-	-	9.99995e-41	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Blast2go	dna methyltransferase 1-associated protein	-	-	0.0	70%

Source	GOs	Term	Type	Identity
Blast2go		GO:0016481	Biological Process	70%
Blast2go	DNA binding	GO:0003677	Molecular Function	70%
Blast2go	transferase activity	GO:0016740	Molecular Function	70%
Blast2go	nucleus	GO:0005634	Cellular Component	70%

Source	InterPros	Term	Type	e value	Identity
Blast2go	DNA methyltransferase 1-associated 1	IPR008468	-	0.0	70%

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
480	8			91	0.999807
481		91	8		0.999807
482		91		8	0.999807
483		86	13		1.0
486	86		4		0.999539
489		9		90	0.999842
492	9			90	0.999842
493	90		9		0.999842
494	90		9		0.999842
497	9	81	4	4	0.999363
500	9	81	4		0.999363
501		9		90	0.999842
508	5		10	85	0.999793
509			15	85	1.0
513		45		55	1.0
514	5		10	85	0.999793
515	10		5	85	0.999793
517		85	15		1.0
598			10	90	0.90298
650		12		87	0.992554
651		12		87	0.992554
652		12		87	0.992554
708		87	12		0.992554
709	12	87			0.992554
710			12	87	0.992554
711		87		12	0.992554
715		11	11	77	0.968132
716	88	11			0.923564
717		11	88		0.923564
721		88	11		0.923564
724	11		88		0.923564
725		11		88	0.923564
726			11	88	0.923564
727	11	88			0.923564
729			11	88	0.923564
960		83		16	0.994512
962	16	83			0.994512
963			16	83	0.994512
967		16		83	0.994512
968	16			83	0.994512
970		16		83	0.994512
973	20	80			0.995493
974			20	80	0.995493
975			20	80	0.995493
976	80			20	0.995493
980		80	20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain