SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18062

Length: 1873 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18062

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glucosamine-fructose-6-phosphate aminotransferase, putative n=1 Tax=Ricinus communis RepID=B9RM60_RICCO	-	-	77%
FL-Next	sp=Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Cyanidium caldarium. Plastid; Chloroplast.	-	-	30%
Blast2go	protein	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glutamine--fructose-6-phosphate transaminase (isomerizing).	EC:2.6.1.16	-	0.0	84%

Source	KEGGs	Term	Identity
Blast2go	Alanine, aspartate and glutamate metabolism	00250	84%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	84%
Blast2go	Metabolic pathways	01100	84%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate biosynthetic process	GO:0016051	Biological Process	84%
Blast2go	glutamine-fructose-6-phosphate transaminase (isomerizing) activity	GO:0004360	Molecular Function	84%
Blast2go	sugar binding	GO:0005529	Molecular Function	84%
Blast2go	mitochondrion	GO:0005739	Cellular Component	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Sugar isomerase (SIS)	IPR001347	-	0.0	84%
Blast2go	Glutamine amidotransferase, type II	IPR017932	-	0.0	84%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: O19908

Fln msg: your sequence is shorter than subject: 507 - 621

Fln protein: MGVMRQLEGAYALIFKSPHYPNELVACKRGSPLLLGIKELAEDGKGGAAFHDGKVRLNKENGKPKELFFASDANALIEHTREVLVLEDNEVAHVKDGGVSVFKFDFDKAKKMGGLPRPASVERALSILEMEVEQIKKGNYEHFMQKEIHEQPESLTTTMRGRLIRGGDSKLKGLLLGGLKDHLWTIRRCRRIIFIGCGTSYNAALATRSIVEELSGVPVTMELASDLLDRQGPIYREDTAVFVSQSGETADTLLALEYALRKGALCVGITNTVGSAIARKTHCGVHINAGCEIGVASTKAYTSQIAVIAMLALAVGEDSISSQSRREAILDGLFDLPNKVREVLRLDGEMKELAMLLMGEQSLLMFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDETLPIIVIATHDNCFSKQQSVIQQLQARRGRLIVMCSKGEASLVCPNGGCRVIEVPQVQDCLQPVINIVPLQLLAYHLTVLRGYDVDQPRNLAKSVTTE*

Protein Length: 508

Fln nts: ATGGGGGTTATGAGGCAACTCGAAGGAGCCTATGCTCTTATTTTCAAGAGTCCACACTACCCAAATGAGTTGGTTGCATGTAAGCGTGGCAGTCCATTGCTGCTTGGCATTAAGGAATTGGCTGAGGATGGGAAAGGTGGAGCTGCTTTTCATGATGGCAAAGTCAGACTGAATAAGGAGAATGGAAAGCCCAAAGAATTGTTTTTTGCAAGTGATGCCAATGCATTAATTGAACATACAAGAGAAGTGTTGGTCCTTGAAGATAATGAAGTTGCTCATGTTAAGGACGGTGGCGTATCAGTATTCAAGTTTGATTTTGACAAAGCAAAGAAGATGGGGGGTTTACCACGTCCTGCTTCTGTTGAACGTGCTTTATCTATCTTGGAGATGGAAGTCGAACAAATAAAAAAGGGAAATTATGAGCATTTCATGCAAAAAGAGATTCATGAACAGCCTGAGTCTTTAACAACAACAATGAGAGGAAGGCTAATTAGAGGAGGGGACAGCAAGTTAAAGGGTCTTCTTTTAGGTGGCCTTAAGGATCATTTGTGGACGATTAGGCGGTGCAGGAGAATTATTTTCATTGGTTGTGGTACAAGCTATAATGCTGCCTTGGCAACTAGATCGATTGTTGAGGAGCTTTCTGGTGTCCCCGTGACAATGGAGCTTGCAAGCGATTTACTAGATAGACAAGGACCAATTTATAGAGAAGACACCGCAGTATTTGTCAGTCAGTCAGGAGAAACAGCAGATACTCTGCTGGCATTAGAATATGCTTTGAGAAAAGGAGCATTGTGTGTTGGAATTACAAATACTGTGGGTAGTGCCATAGCAAGGAAAACACACTGCGGTGTTCATATCAATGCTGGGTGTGAGATTGGTGTTGCTAGTACTAAGGCTTACACAAGTCAGATAGCAGTAATTGCTATGTTGGCCCTGGCTGTTGGAGAGGATTCAATTTCGAGTCAATCACGTAGAGAGGCAATATTAGATGGACTTTTTGACTTGCCAAACAAAGTCAGAGAGGTATTGAGGCTGGATGGTGAAATGAAGGAGCTTGCGATGCTATTGATGGGTGAGCAGTCACTACTAATGTTTGGCCGTGGATATAACTATGCCACAGCATTGGAGGGTGCCTTGAAAGTCAAAGAAGTGGCGCTTATGCACAGTGAAGGAATTCTTGCTGGTGAAATGAAGCATGGCCCTCTAGCACTTGTCGATGAGACACTTCCGATAATTGTGATTGCGACACATGATAATTGTTTCAGCAAGCAGCAATCGGTAATTCAACAACTTCAGGCACGTAGAGGGCGCTTGATAGTGATGTGCTCGAAGGGAGAGGCATCCTTGGTATGCCCAAATGGCGGTTGTCGTGTTATTGAAGTTCCTCAAGTACAGGATTGCCTTCAACCTGTCATTAACATCGTACCATTGCAGCTCCTAGCATATCATCTTACTGTTCTTCGTGGTTATGATGTCGATCAACCTCGTAACCTTGCAAAGAGTGTCACGACTGAGTAA___AAAGAGATTTTTTTCCTCCTTGTTCCTTGGCGTTGAATTGTTATAGGTAACATTTGAATATCCGTATAAATGACACAAGAAACAGACTCAGGCATACAGGAATGGGGGTCCAATTTATTTTTCGTTCCCCCCTCGGCCATGGAGGGGATCGCTTGATATTTAAGCTTCCCTTGGAAACTTTGCAATTAATAGGGAAGGAGGAATTACAGCCGTACTCTGGTTCTGTTGTCTGTAATTCATTATTGAAACATTTCTATCTTCTAAAGCATTCGAGGGACATTAGAAACATGGTAACTCCATGCATTTTTTTATGTATAAAATAAATTGATTTTTCCTGACTTAAAAGAAGTGG

Fln Alignment:

sp_v1.1_unigene18062___ASDANALIEHTREVLVLEDNEVAHVKDGGVSVF---KFDFDKAKKMGGLPRPASVERALSILEMEVEQIKKGNYEHFMQKEIHEQPESLTTTMRGRLIRGGDSXXXXXXXXXXXDHLWTXXXXXXXXXXXXXTSYNAALATRSIVEELSGVPVTMELASDLLDRQGPIYREDTAVFVSQSGETADTLLALEYALRKGAL--------CVGITNTVGSAIARKTHCGVHINAGCEIGVASTKAYTSQIAVIAMLALAVGEDSISSQSRR-EAILDGLFDLPNKVREVLRLD-GEMKELAMLLMGEQSLLMFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDETLPIIVIATHDNCFSKQQSVIQQLQARRGRLIVMCSKGEASLVCPNGGCRVIEVPQVQDCLQPVINIVPLQLLAYHLTVLRGYDVDQPRNLAKSVTTE
O19908_______________SSDPIALIPYTKNFIQLHDRELGIISISQLAIYNKGKFTYPSRRFKANLNDLIT---------------NKASFDSYTLKEIHDQKKVL----RNLIISTLQSEKSIDESGQL--HL-EYKKIKNFQIIACGSSFNAALVGKVILEKLIRIPVHVYYGSEFKTNLPPLLPCTLTIAVSQSGETGDMLSAIEIEKSRRKFQNTVYKPYLLSITNKNYSSITKKTAQSIDLKAGIEIGVAATKTFTAQTLSFYLLALKLAEHKFTLRKKEINKHLDEIRNLPKAIAHLLIKDESSIKWLSKQLKEISKCFYIGKGLNLGSALEGALKLKEISYIHCDGYAAGEIKHGPIALVENNTLIITITDPEQSQESTFASSQEAKARGAVLLAITHIEDSSIY--QTFDFIIKIPKISQICASITSSVSLQLFAYYMAYYKGNDIDKPRNLAKSVTVE

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
606		16		83	0.994512
607	83		16		0.994512
1438		90		10	0.999898
1453		89	10		0.999919
1454	89		10		0.999919
1456	10	89			0.999919
1457		10		89	0.999919
1458			10	89	0.999919
1465	11	88			0.999937
1466	11			88	0.999937
1469	11		88		0.999937
1470	11			88	0.999937
1471		11	88		0.999937
1472		11	88		0.999937
1474		11		88	0.999937
1475	88		11		0.999937
1477	11		88		0.999937
1479		11		88	0.999937
1480		11	88		0.999937
1482		88		11	0.999937
1484	88	11			0.999937
1486	12	87			0.999964
1489		87	12		0.999964
1490	12	87			0.999964
1491			12	87	0.999964
1492		87		12	0.999964
1495	87	12			0.999964
1500			12	87	0.999964
1532	50			50	1.0
1533		50		50	1.0
1555		20		80	0.995493
1561	80		20		0.995493
1849	50			50	1.0
1860	33			33	0.997753

SSRs (tot: 1)

Start position	End position	Sequence	Length
727	739	GTCA GTCA GTCA G	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain