SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18056

Length: 1251 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18056

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Acyl-ACP thioesterase n=1 Tax=Iris tectorum RepID=Q8S9G4_9ASPA	-	-	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	acyl-acp thioesterase	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Oleoyl-[acyl-carrier-protein] hydrolase.	EC:3.1.2.14	-	0.0	82%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Fatty acid biosynthesis	00061		0.0	82%
Blast2go	Metabolic pathways	01100		0.0	82%

Source	GOs	Term	Type	Identity
Blast2go	fatty acid biosynthetic process	GO:0006633	Biological Process	82%
Blast2go	oleoyl-[acyl-carrier-protein] hydrolase activity	GO:0004320	Molecular Function	82%
Blast2go	acyl carrier activity	GO:0000036	Molecular Function	82%
Blast2go	chloroplast	GO:0009507	Cellular Component	82%
Blast2go	mitochondrion	GO:0005739	Cellular Component	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Acyl-ACP thioesterase	IPR002864	-	0.0	82%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LS31

Fln msg: Distance to subject end: 38 aas, your sequence is shorter than subject: 347 - 386

Fln protein: MLSVGNCHCRPWKCRTNAITFKSPFTSSSPWLNAVPAPLNRNFRSFKLEISASASSKTRHCEEEAQQLSLADRLRPGGRAPDGLSYKENFTIRCYEVGVNRTATIEAVANLLQEVACNHAQSVGFSTDGFATTPTMRKRHLIWVAARMHIEVYKYPAWGDVTEIETWCQSEGKIGTRRDWILKDATTENIIGRATSTWVMMNQDTRRLYRVTDDVRDEYMIHCPKSPRLAFPEENNNSSKKIPKLDDPAQHSRSGLMPRRADLDMNQHVNNVTYIGWVLESMPQEVLDTHELEMITLDYRRECSKDDIVESLTSLLSEPSDSSAVENGTFQSNGNATSTNGAATIRS

Protein Length: 348

Fln nts: ATGGGGGCCACAAATCTGAGAACAATTAGAAAACATGGTCTGTGGCGTGACAAGCGAGAGTCACTGAGAGGAAGGCCAGATGTGTCATGGGGAAAATGTGCCATCATAGTTGGGTACAAATAATGAGCCACCTGCTCCATGTTTTCGAAGTTTTCTGTTGGATTTGTCCGGGTGAGAGAGCGTTCGTTCGTTGCGCGAGAGGGGCAAA_-_ATGCTGAGCGTGGGGAATTGCCATTGCCGCCCCTGGAAGTGCCGTACGAACGCGATCACATTTAAATCACCATTTACTTCATCATCACCATGGTTAAATGCAGTCCCTGCTCCTTTAAACAGGAACTTCAGATCCTTCAAGCTCGAAATCTCCGCCTCTGCTTCCTCCAAGACAAGACACTGTGAGGAGGAAGCGCAGCAGCTGAGCTTAGCGGATCGGCTGAGGCCCGGCGGCAGAGCCCCCGATGGGCTCTCGTACAAGGAGAACTTTACCATTCGCTGCTATGAAGTCGGAGTTAACCGCACTGCCACCATTGAGGCCGTCGCTAATCTGCTCCAGGAAGTTGCATGCAACCATGCCCAGAGTGTGGGGTTCTCCACGGATGGATTCGCCACCACGCCTACCATGAGAAAGCGTCACCTCATCTGGGTCGCCGCTCGCATGCACATCGAGGTCTACAAGTATCCCGCTTGGGGGGACGTAACGGAAATCGAGACATGGTGCCAAAGTGAGGGGAAAATTGGGACAAGACGTGACTGGATTCTCAAGGATGCGACCACAGAGAACATCATTGGCCGAGCCACGAGCACATGGGTGATGATGAATCAGGATACCAGACGGCTTTATAGAGTAACTGATGATGTGAGGGATGAATACATGATTCATTGCCCAAAATCTCCCAGGCTGGCATTTCCGGAGGAAAATAATAACAGTTCCAAAAAGATACCTAAGCTTGATGATCCTGCACAACACTCAAGATCTGGTCTTATGCCTAGGAGAGCTGATCTGGATATGAATCAGCATGTGAATAATGTGACATACATCGGCTGGGTTCTGGAGAGCATGCCACAAGAAGTTTTAGATACGCATGAGCTAGAAATGATAACTCTTGATTATAGGCGAGAATGCAGCAAAGATGACATTGTTGAATCTTTGACAAGTTTACTATCTGAACCATCCGATAGTAGTGCAGTTGAAAATGGTACTTTTCAATCTAATGGAAATGCAACGTCCACAAATGGAGCTGCAACAATTAGAAGTCC

Fln Alignment:

sp_v1.1_unigene18056___MLSVGNCHCRPWKCRTNAITFKSPFTSSSPWLNAVPAPLNRNFRSFKLEISASASSKTRHCEEEAQQLSLADRLRPGGRAPDGLSYKENFTIRCYEVGVNRTATIEAVANLLQEVACNHAQSVGFSTDGFATTPTMRKRHLIWVAARMHIEVYKYPAWGDVTEIETWCQSEGKIGTRRDWILKDATTENIIGRATSTWVMMNQDTRRLYRVTDDVRDEYMIHCPKSPRLAFPEENNNSSKKIPKLDDPAQHSRSGLMPRRADLDMNQHVNNVTYIGWVLESMPQEVLDTHELEMITLDYRRECSKDDIVESLTSLLSEPSDSSAVENGTFQSNGNATSTNGAATIRS
B8LS31_______________MLSVGNCHCRPWKCRANAITIKSPFTSSSPWINTVPAPSNRTLRSFKLEISASASSKTRICEEEAQQLSLADRLRPGGLAPDGFSYKENFTIRCYEVGVNRTATIEAVANLLQEVACNHAQSVGFSTDGFATTPTMRKRHLIWVAARMHIEVYKYPAWGDVTEIETWCQSEGKIGTRRDWILKDATTDNIIGRATSTWVMMNQDTRRLYRVTDDVRDEYMVHCPKSLRLAFPEENNNSSKKIPKLEDPAQHSRSGLMPRRADLDMNQHVNNVTYIGWVLESMPQEVLDTHELEMITLDYRRECNKDDIVESLTSLLSEKSDSSAVESSTFASNGNATSTNGVATTRS

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
39			25	75	0.996473
40		75	25		0.996473
41			25	75	0.996473
141	14		85		0.993533
143			16	83	0.994512
144			16	83	0.994512
145			16	83	0.994512
146		83	16		0.994512
492	91			8	0.999807
493			8	91	0.999807
495	91	8			0.999807
496	91			8	0.999807
500	8		91		0.999807
501		8	91		0.999807
502	90			9	0.999842
503		8	91		0.999807
893		10		90	0.90298
902		10		90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain