SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17938

Length: 984 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17938

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	enzyme of the cupin superfamily	-	-	3.0e-31	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	enzyme of the cupin superfamily	-	-	0.0	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	81%

Source	InterPros	Term	Type	Identity
Blast2go	Domain of unknown function DUF861, cupin-3	IPR008579	-	81%
Blast2go	Cupin, RmlC-type	IPR011051	-	81%
Blast2go	RmlC-like jelly roll fold	IPR014710	-	81%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
81	20			80	0.995493
87			20	80	0.995493
88			20	80	0.995493
114		60		40	1.0
195	60		40		1.0
223	80		20		0.995493
468	84		15		0.999986

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain