SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17778

Length: 620 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17778

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TW84_VITVI	-	-	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	46%
Blast2go	protein hothead	-	-	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Lyases, Carbon-carbon lyases, Aldehyde-lyases.	EC:4.1.2.-	-	0.0	77%

Source	KEGGs	Term	Identity
Blast2go	Pentose phosphate pathway	00030	77%
Blast2go	Fructose and mannose metabolism	00051	77%
Blast2go	Lysine degradation	00310	77%
Blast2go	Tyrosine metabolism	00350	77%
Blast2go	Phenylalanine, tyrosine and tryptophan biosynthesis	00400	77%
Blast2go	alpha-Linolenic acid metabolism	00592	77%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	77%
Blast2go	Metabolic pathways	01100	77%

Source	GOs	Term	Type	Identity
Blast2go	alcohol metabolic process	GO:0006066	Biological Process	77%
Blast2go	oxidoreductase activity, acting on CH-OH group of donors	GO:0016614	Molecular Function	77%
Blast2go	aldehyde-lyase activity	GO:0016832	Molecular Function	77%
Blast2go	flavin adenine dinucleotide binding	GO:0050660	Molecular Function	77%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	77%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
193	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain