SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17726

Length: 825 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17726

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RNA recognition motif (RRM)-containing protein	-	-	2.0e-23	60%
FL-Next	sp=Glycine-rich RNA-binding protein 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	41%
Blast2go	rna binding	-	-	0.0	73%

Source	GOs	Term	Type	Identity
Blast2go	RNA binding	GO:0003723	Molecular Function	73%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	73%
Blast2go	chloroplast	GO:0009507	Cellular Component	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	RNA recognition motif domain	IPR000504	-	0.0	73%
Blast2go	Nucleotide-binding, alpha-beta plait	IPR012677	-	0.0	73%

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
526	88			11	0.923564
528			11	88	0.923564
529	88		11		0.923564
579	44	55			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain