SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene17648

Length: 700 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene17648

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Heat shock protein 17.5 n=1 Tax=Malus x domestica RepID=B2ZBG8_MALDO	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	heat shock protein	-	-	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to stress	GO:0006950	Biological Process	0.0	86%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Heat shock protein Hsp20	IPR002068	-	0.0	86%
Blast2go	HSP20-like chaperone	IPR008978	-	0.0	86%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
228	14			85	0.993533
306			83	16	0.994512
332	20		80		0.995493
501		10		90	0.90298
521			87	12	0.992554
583		14		85	0.993533
597	28	71			1.0
628		16		83	0.994512
649			87	12	0.992554
650	87		12		0.992554
651	87		12		0.992554
652	87		12		0.992554
674	87		12		0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain